STRINGSTRING
WN55_02779 WN55_02779 WN55_05294 WN55_05294 WN55_00645 WN55_00645 WN55_07583 WN55_07583 WN55_10241 WN55_10241 WN55_07290 WN55_07290 WN55_08326 WN55_08326 WN55_09877 WN55_09877 WN55_02234 WN55_02234 WN55_03088 WN55_03088 WN55_05054 WN55_05054 WN55_07440 WN55_07440
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WN55_02779Programmed cell death protein 6. (144 aa)
WN55_05294Protein transport protein Sec24B. (795 aa)
WN55_00645Peflin. (179 aa)
WN55_07583Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
WN55_10241Protein SEC13 like protein; Belongs to the WD repeat SEC13 family. (311 aa)
WN55_07290GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
WN55_08326Vacuolar ATPase assembly integral membrane protein VMA21 homolog; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum; Belongs to the VMA21 family. (87 aa)
WN55_09877Protein transport protein Sec31A. (1224 aa)
WN55_02234Protein transport protein Sec24C. (1326 aa)
WN55_03088Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (213 aa)
WN55_05054Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
WN55_07440Vesicle transport through interaction with t-SNAREs like protein 1A. (219 aa)
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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