12 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_04553	Vacuolar protein sorting-associated protein 18 like protein. (200 aa)
	WN55_09594	Syntaxin-12; Belongs to the syntaxin family. (271 aa)
	WN55_05033	Vam6/Vps39-like protein. (877 aa)
	WN55_11508	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (832 aa)
	WN55_04685	Vacuolar protein sorting-associated protein 41 like protein. (729 aa)
	WN55_04552	Vacuolar protein sorting-associated protein 18 like protein. (623 aa)
	WN55_05543	Ras-related protein Rab-5C. (214 aa)
	WN55_09369	Rabenosyn-5. (509 aa)
	WN55_08445	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (416 aa)
	WN55_00719	Vacuolar protein sorting-associated protein 8 like protein. (881 aa)
	WN55_00718	Vacuolar protein sorting-associated protein 8 like protein. (297 aa)
	WN55_08444	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (151 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00718	WN55_00719	A0A154NYK1	A0A154NYE5	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 8 like protein.	0.927
WN55_00718	WN55_04552	A0A154NYK1	A0A154P1A8	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 18 like protein.	0.811
WN55_00718	WN55_04553	A0A154NYK1	A0A154P1A0	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 18 like protein.	0.811
WN55_00718	WN55_04685	A0A154NYK1	A0A154P1E0	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 41 like protein.	0.591
WN55_00718	WN55_05033	A0A154NYK1	A0A154PNQ8	Vacuolar protein sorting-associated protein 8 like protein.	Vam6/Vps39-like protein.	0.933
WN55_00718	WN55_05543	A0A154NYK1	A0A154PPM4	Vacuolar protein sorting-associated protein 8 like protein.	Ras-related protein Rab-5C.	0.697
WN55_00718	WN55_09369	A0A154NYK1	A0A154PTB7	Vacuolar protein sorting-associated protein 8 like protein.	Rabenosyn-5.	0.418
WN55_00718	WN55_11508	A0A154NYK1	A0A154PAW8	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.941
WN55_00719	WN55_00718	A0A154NYE5	A0A154NYK1	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 8 like protein.	0.927
WN55_00719	WN55_04552	A0A154NYE5	A0A154P1A8	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 18 like protein.	0.831
WN55_00719	WN55_04553	A0A154NYE5	A0A154P1A0	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 18 like protein.	0.831
WN55_00719	WN55_04685	A0A154NYE5	A0A154P1E0	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 41 like protein.	0.595
WN55_00719	WN55_05033	A0A154NYE5	A0A154PNQ8	Vacuolar protein sorting-associated protein 8 like protein.	Vam6/Vps39-like protein.	0.945
WN55_00719	WN55_05543	A0A154NYE5	A0A154PPM4	Vacuolar protein sorting-associated protein 8 like protein.	Ras-related protein Rab-5C.	0.697
WN55_00719	WN55_09369	A0A154NYE5	A0A154PTB7	Vacuolar protein sorting-associated protein 8 like protein.	Rabenosyn-5.	0.418
WN55_00719	WN55_11508	A0A154NYE5	A0A154PAW8	Vacuolar protein sorting-associated protein 8 like protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.952
WN55_04552	WN55_00718	A0A154P1A8	A0A154NYK1	Vacuolar protein sorting-associated protein 18 like protein.	Vacuolar protein sorting-associated protein 8 like protein.	0.811
WN55_04552	WN55_00719	A0A154P1A8	A0A154NYE5	Vacuolar protein sorting-associated protein 18 like protein.	Vacuolar protein sorting-associated protein 8 like protein.	0.831
WN55_04552	WN55_04553	A0A154P1A8	A0A154P1A0	Vacuolar protein sorting-associated protein 18 like protein.	Vacuolar protein sorting-associated protein 18 like protein.	0.899
WN55_04552	WN55_04685	A0A154P1A8	A0A154P1E0	Vacuolar protein sorting-associated protein 18 like protein.	Vacuolar protein sorting-associated protein 41 like protein.	0.978