STRINGSTRING
WN55_09515 WN55_09515 WN55_00789 WN55_00789 WN55_00780 WN55_00780 WN55_01005 WN55_01005 WN55_02375 WN55_02375 WN55_03603 WN55_03603 WN55_03634 WN55_03634 WN55_03471 WN55_03471 WN55_05970 WN55_05970 WN55_05666 WN55_05666 WN55_05543 WN55_05543 WN55_06719 WN55_06719 WN55_09744 WN55_09744 WN55_05290 WN55_05290 WN55_02793 WN55_02793 WN55_04685 WN55_04685 WN55_05816 WN55_05816 WN55_08361 WN55_08361 WN55_10754 WN55_10754 WN55_11337 WN55_11337 WN55_00197 WN55_00197
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WN55_09515Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (467 aa)
WN55_00789Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (167 aa)
WN55_00780Ras-related protein Rab-26. (290 aa)
WN55_01005Golgi phosphoprotein 3. (305 aa)
WN55_02375Exocyst complex component 5. (693 aa)
WN55_03603Charged multivesicular body protein 4b. (221 aa)
WN55_03634Protein Malvolio. (281 aa)
WN55_03471Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (871 aa)
WN55_05970Charged multivesicular body protein 5. (221 aa)
WN55_05666Ras-related protein Rab-35. (184 aa)
WN55_05543Ras-related protein Rab-5C. (214 aa)
WN55_06719Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (154 aa)
WN55_09744Exocyst complex component 4. (159 aa)
WN55_05290Ras-related protein Rab-8A. (209 aa)
WN55_02793Ras-related protein Rab-30. (205 aa)
WN55_04685Vacuolar protein sorting-associated protein 41 like protein. (729 aa)
WN55_05816Ras-related protein Rab-14. (218 aa)
WN55_08361AP-2 complex subunit beta. (835 aa)
WN55_10754Apoptosis regulatory protein Siva. (171 aa)
WN55_11337Ras-related protein Rab-11A. (215 aa)
WN55_00197Ras-related protein Rab-10. (200 aa)
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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