55 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_11531	Syntaxin-16; Belongs to the syntaxin family. (325 aa)
	WN55_00885	Uncharacterized protein. (641 aa)
	WN55_00515	Synaptobrevin. (138 aa)
	WN55_01865	Biogenesis of lysosome-related organelles complex 1 subunit 1. (128 aa)
	WN55_02260	ADP-ribosylation factor-like protein 8B-A; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	WN55_01625	Vesicle transport protein SEC20. (227 aa)
	WN55_02596	Vesicle transport protein USE1. (252 aa)
	WN55_03088	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (213 aa)
	WN55_02602	NSFL1 cofactor p47. (379 aa)
	WN55_04025	Tubby-related protein 4; Belongs to the TUB family. (1214 aa)
	WN55_04111	Golgi SNAP receptor complex member 1. (220 aa)
	WN55_07369	Syntaxin-18. (324 aa)
	WN55_05342	Syntaxin-6; Belongs to the syntaxin family. (302 aa)
	WN55_04458	Uncharacterized protein. (568 aa)
	WN55_05607	Syntaxin-1B. (196 aa)
	WN55_05033	Vam6/Vps39-like protein. (877 aa)
	WN55_05543	Ras-related protein Rab-5C. (214 aa)
	WN55_07416	Syntaxin-8. (246 aa)
	WN55_07756	Pleckstrin homology domain-containing family M member 3. (646 aa)
	WN55_08444	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (151 aa)
	WN55_08445	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (416 aa)
	WN55_07440	Vesicle transport through interaction with t-SNAREs like protein 1A. (219 aa)
	WN55_09369	Rabenosyn-5. (509 aa)
	WN55_00044	Syntaxin-12. (267 aa)
	WN55_03846	UV radiation resistance-associated gene protein. (894 aa)
	WN55_05309	Uncharacterized protein. (610 aa)
	WN55_00719	Vacuolar protein sorting-associated protein 8 like protein. (881 aa)
	WN55_00718	Vacuolar protein sorting-associated protein 8 like protein. (297 aa)
	WN55_09594	Syntaxin-12; Belongs to the syntaxin family. (271 aa)
	WN55_09706	Syntaxin-17. (301 aa)
	WN55_02699	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (221 aa)
	WN55_05290	Ras-related protein Rab-8A. (209 aa)
	WN55_00675	Syntaxin-5; Belongs to the syntaxin family. (366 aa)
	WN55_05401	Synaptosomal-associated protein 29. (263 aa)
	WN55_04553	Vacuolar protein sorting-associated protein 18 like protein. (200 aa)
	WN55_04552	Vacuolar protein sorting-associated protein 18 like protein. (623 aa)
	WN55_04685	Vacuolar protein sorting-associated protein 41 like protein. (729 aa)
	WN55_04776	Synaptobrevin. (122 aa)
	WN55_07155	Ras-related protein Rab-7a. (207 aa)
	WN55_07583	Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
	WN55_07947	BET1 like protein. (113 aa)
	WN55_10277	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (276 aa)
	WN55_10557	Atlastin. (553 aa)
	WN55_08214	Syntaxin-1A; Belongs to the syntaxin family. (470 aa)
	WN55_08558	Uncharacterized protein. (353 aa)
	WN55_07732	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family. (795 aa)
	WN55_09844	Uncharacterized protein. (705 aa)
	WN55_10811	Sorting nexin; Involved in several stages of intracellular trafficking. (408 aa)
	WN55_10786	Uncharacterized protein. (938 aa)
	WN55_11342	Synaptobrevin like protein YKT6; Belongs to the synaptobrevin family. (200 aa)
	WN55_11508	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (832 aa)
	WN55_09274	SNARE-associated protein Snapin. (159 aa)
	WN55_11337	Ras-related protein Rab-11A. (215 aa)
	WN55_11076	Synaptotagmin-11. (428 aa)
	WN55_11598	Biogenesis of lysosome-related organelles complex 1 subunit 2. (165 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00044	WN55_00515	A0A154NW01	A0A154PD95	Syntaxin-12.	Synaptobrevin.	0.821
WN55_00044	WN55_00675	A0A154NW01	A0A154P0D0	Syntaxin-12.	Syntaxin-5; Belongs to the syntaxin family.	0.826
WN55_00044	WN55_02596	A0A154NW01	A0A154PH91	Syntaxin-12.	Vesicle transport protein USE1.	0.579
WN55_00044	WN55_02699	A0A154NW01	A0A154NZA9	Syntaxin-12.	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.	0.905
WN55_00044	WN55_03088	A0A154NW01	A0A154PI60	Syntaxin-12.	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.	0.920
WN55_00044	WN55_04111	A0A154NW01	A0A154PL95	Syntaxin-12.	Golgi SNAP receptor complex member 1.	0.696
WN55_00044	WN55_04552	A0A154NW01	A0A154P1A8	Syntaxin-12.	Vacuolar protein sorting-associated protein 18 like protein.	0.686
WN55_00044	WN55_04553	A0A154NW01	A0A154P1A0	Syntaxin-12.	Vacuolar protein sorting-associated protein 18 like protein.	0.686
WN55_00044	WN55_04685	A0A154NW01	A0A154P1E0	Syntaxin-12.	Vacuolar protein sorting-associated protein 41 like protein.	0.850
WN55_00044	WN55_04776	A0A154NW01	A0A154P1M7	Syntaxin-12.	Synaptobrevin.	0.821
WN55_00044	WN55_05033	A0A154NW01	A0A154PNQ8	Syntaxin-12.	Vam6/Vps39-like protein.	0.821
WN55_00044	WN55_05342	A0A154NW01	A0A154PLL2	Syntaxin-12.	Syntaxin-6; Belongs to the syntaxin family.	0.854
WN55_00044	WN55_05401	A0A154NW01	A0A154P0L9	Syntaxin-12.	Synaptosomal-associated protein 29.	0.815
WN55_00044	WN55_05607	A0A154NW01	A0A154PN50	Syntaxin-12.	Syntaxin-1B.	0.757
WN55_00044	WN55_07369	A0A154NW01	A0A154PSE5	Syntaxin-12.	Syntaxin-18.	0.613
WN55_00044	WN55_07416	A0A154NW01	A0A154PSF3	Syntaxin-12.	Syntaxin-8.	0.895
WN55_00044	WN55_07440	A0A154NW01	A0A154PS69	Syntaxin-12.	Vesicle transport through interaction with t-SNAREs like protein 1A.	0.968
WN55_00044	WN55_07583	A0A154NW01	A0A154P2L7	Syntaxin-12.	Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.816
WN55_00044	WN55_07732	A0A154NW01	A0A154P656	Syntaxin-12.	Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.	0.711
WN55_00044	WN55_07947	A0A154NW01	A0A154P2U4	Syntaxin-12.	BET1 like protein.	0.899