15 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_03471	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (871 aa)
	WN55_02120	Clathrin interactor 1. (1479 aa)
	WN55_00098	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (417 aa)
	WN55_05861	AP-1 complex subunit gamma. (802 aa)
	WN55_07110	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (422 aa)
	WN55_07537	Vesicular acetylcholine transporter. (559 aa)
	WN55_08361	AP-2 complex subunit beta. (835 aa)
	WN55_09238	Epsin-2. (567 aa)
	WN55_11089	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (122 aa)
	WN55_01082	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (220 aa)
	WN55_04034	MYCBP-associated protein. (632 aa)
	WN55_04290	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1647 aa)
	WN55_05621	Synergin gamma. (731 aa)
	WN55_05543	Ras-related protein Rab-5C. (214 aa)
	WN55_06787	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. (863 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00098	WN55_02120	A0A154NY20	A0A154NXC8	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin interactor 1.	0.465
WN55_00098	WN55_04290	A0A154NY20	A0A154PLM2	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.558
WN55_00098	WN55_05861	A0A154NY20	A0A154P0G4	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.955
WN55_00098	WN55_06787	A0A154NY20	A0A154PR10	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.	0.947
WN55_00098	WN55_07110	A0A154NY20	A0A154P3V9	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.489
WN55_00098	WN55_11089	A0A154NY20	A0A154PBR4	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.540
WN55_01082	WN55_02120	A0A154PDY8	A0A154NXC8	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin interactor 1.	0.875
WN55_01082	WN55_03471	A0A154PDY8	A0A154PJG1	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.755
WN55_01082	WN55_04290	A0A154PDY8	A0A154PLM2	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.999
WN55_01082	WN55_05543	A0A154PDY8	A0A154PPM4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Ras-related protein Rab-5C.	0.775
WN55_01082	WN55_05621	A0A154PDY8	A0A154PPE9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Synergin gamma.	0.856
WN55_01082	WN55_05861	A0A154PDY8	A0A154P0G4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-1 complex subunit gamma.	0.907
WN55_01082	WN55_06787	A0A154PDY8	A0A154PR10	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles.	0.956
WN55_01082	WN55_07110	A0A154PDY8	A0A154P3V9	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.918
WN55_01082	WN55_08361	A0A154PDY8	A0A154P6N7	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP-2 complex subunit beta.	0.951
WN55_01082	WN55_09238	A0A154PDY8	A0A154PAD7	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	Epsin-2.	0.957
WN55_01082	WN55_11089	A0A154PDY8	A0A154PBR4	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.922
WN55_02120	WN55_00098	A0A154NXC8	A0A154NY20	Clathrin interactor 1.	AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.465
WN55_02120	WN55_01082	A0A154NXC8	A0A154PDY8	Clathrin interactor 1.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.875
WN55_02120	WN55_04290	A0A154NXC8	A0A154PLM2	Clathrin interactor 1.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.874