11 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_03922	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (655 aa)
	WN55_05290	Ras-related protein Rab-8A. (209 aa)
	WN55_05861	AP-1 complex subunit gamma. (802 aa)
	WN55_09304	Phytanoyl-CoA dioxygenase domain-containing protein 1 like protein. (275 aa)
	WN55_02776	Maspardin. (292 aa)
	WN55_05621	Synergin gamma. (731 aa)
	WN55_07110	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (422 aa)
	WN55_07537	Vesicular acetylcholine transporter. (559 aa)
	WN55_11169	Trans-Golgi network integral membrane protein 2. (500 aa)
	WN55_10990	JNK-interacting protein 3. (1243 aa)
	WN55_01096	Tetratricopeptide repeat protein 5. (451 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_05290	WN55_05621	A0A154NZQ5	A0A154PPE9	Ras-related protein Rab-8A.	Synergin gamma.	0.540
WN55_05621	WN55_05290	A0A154PPE9	A0A154NZQ5	Synergin gamma.	Ras-related protein Rab-8A.	0.540
WN55_05621	WN55_05861	A0A154PPE9	A0A154P0G4	Synergin gamma.	AP-1 complex subunit gamma.	0.812
WN55_05621	WN55_07110	A0A154PPE9	A0A154P3V9	Synergin gamma.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.442
WN55_05861	WN55_05621	A0A154P0G4	A0A154PPE9	AP-1 complex subunit gamma.	Synergin gamma.	0.812
WN55_05861	WN55_07110	A0A154P0G4	A0A154P3V9	AP-1 complex subunit gamma.	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	0.999
WN55_07110	WN55_05621	A0A154P3V9	A0A154PPE9	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	Synergin gamma.	0.442
WN55_07110	WN55_05861	A0A154P3V9	A0A154P0G4	AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit gamma.	0.999