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WN55_05054 WN55_05054 WN55_01246 WN55_01246 WN55_00634 WN55_00634 WN55_00098 WN55_00098 WN55_05294 WN55_05294 WN55_03879 WN55_03879 WN55_02137 WN55_02137 WN55_02109 WN55_02109 WN55_08722 WN55_08722 WN55_05805 WN55_05805 WN55_05861 WN55_05861 WN55_06417 WN55_06417 WN55_04838 WN55_04838 WN55_05806 WN55_05806 WN55_07951 WN55_07951 WN55_07583 WN55_07583 WN55_10241 WN55_10241 WN55_04580 WN55_04580 WN55_07110 WN55_07110 WN55_10488 WN55_10488 WN55_07290 WN55_07290 e(y)2 e(y)2 WN55_08569 WN55_08569 WN55_08247 WN55_08247 WN55_08149 WN55_08149 WN55_08191 WN55_08191 WN55_08361 WN55_08361 WN55_08165 WN55_08165 WN55_09918 WN55_09918 WN55_09210 WN55_09210 WN55_07998 WN55_07998 WN55_10811 WN55_10811 WN55_09023 WN55_09023 WN55_10763 WN55_10763 WN55_11402 WN55_11402 WN55_11396 WN55_11396 WN55_11508 WN55_11508 WN55_11540 WN55_11540 WN55_00901 WN55_00901 WN55_00928 WN55_00928 WN55_11089 WN55_11089 WN55_11103 WN55_11103 WN55_00789 WN55_00789 WN55_00507 WN55_00507 WN55_11040 WN55_11040 WN55_01122 WN55_01122 WN55_00849 WN55_00849 WN55_01858 WN55_01858 WN55_00353 WN55_00353 WN55_02234 WN55_02234 WN55_01548 WN55_01548 WN55_01734 WN55_01734 WN55_03716 WN55_03716 WN55_04195 WN55_04195 WN55_05927 WN55_05927 WN55_06825 WN55_06825 WN55_06787 WN55_06787 WN55_06905 WN55_06905 WN55_07228 WN55_07228 WN55_06917 WN55_06917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WN55_05054Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
WN55_01246AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (156 aa)
WN55_00634Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (619 aa)
WN55_00098AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (417 aa)
WN55_05294Protein transport protein Sec24B. (795 aa)
WN55_03879Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (500 aa)
WN55_02137Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (383 aa)
WN55_02109Autophagy-related protein 3. (302 aa)
WN55_08722Mitochondrial import inner membrane translocase subunit Tim9. (92 aa)
WN55_05805Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (161 aa)
WN55_05861AP-1 complex subunit gamma. (802 aa)
WN55_06417GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
WN55_04838GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. (814 aa)
WN55_05806Importin subunit alpha; Belongs to the importin alpha family. (520 aa)
WN55_07951Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1214 aa)
WN55_07583Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
WN55_10241Protein SEC13 like protein; Belongs to the WD repeat SEC13 family. (311 aa)
WN55_04580Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (201 aa)
WN55_07110AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (422 aa)
WN55_10488Nucleoporin seh1-A; Belongs to the WD repeat SEC13 family. (408 aa)
WN55_07290GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
e(y)2Enhancer of yellow 2 transcription factor; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (94 aa)
WN55_08569Mitochondrial import inner membrane translocase subunit Tim9 B. (89 aa)
WN55_08247Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (251 aa)
WN55_08149Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (466 aa)
WN55_08191Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (890 aa)
WN55_08361AP-2 complex subunit beta. (835 aa)
WN55_08165Nuclear pore protein. (825 aa)
WN55_09918Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (722 aa)
WN55_09210Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (896 aa)
WN55_07998Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (619 aa)
WN55_10811Sorting nexin; Involved in several stages of intracellular trafficking. (408 aa)
WN55_09023Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (957 aa)
WN55_10763Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (876 aa)
WN55_11402Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (845 aa)
WN55_11396Protein transport protein Sec61 subunit alpha isoform 2. (451 aa)
WN55_11508Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (832 aa)
WN55_11540Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (212 aa)
WN55_00901Vacuolar protein sorting-associated protein 37A. (424 aa)
WN55_00928Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (705 aa)
WN55_11089AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (122 aa)
WN55_11103Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (684 aa)
WN55_00789Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (167 aa)
WN55_00507Importin subunit alpha; Belongs to the importin alpha family. (529 aa)
WN55_1104060S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (506 aa)
WN55_01122Mitochondrial import inner membrane translocase subunit Tim8; Belongs to the small Tim family. (96 aa)
WN55_00849Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (204 aa)
WN55_01858AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (471 aa)
WN55_00353Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (160 aa)
WN55_02234Protein transport protein Sec24C. (1326 aa)
WN55_01548Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (384 aa)
WN55_01734Mitochondrial import inner membrane translocase subunit Tim10. (96 aa)
WN55_03716Mitochondrial import inner membrane translocase subunit Tim13-B; Belongs to the small Tim family. (90 aa)
WN55_04195ER lumen protein-retaining receptor. (212 aa)
WN55_05927AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1149 aa)
WN55_06825Vacuolar protein sorting-associated protein 37B. (217 aa)
WN55_06787AP-2 complex subunit alpha; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. (863 aa)
WN55_06905Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (291 aa)
WN55_07228Nucleoporin NUP53. (712 aa)
WN55_06917Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (467 aa)
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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