STRINGSTRING
WN55_03411 WN55_03411 WN55_03088 WN55_03088 WN55_07416 WN55_07416 WN55_07369 WN55_07369 WN55_07440 WN55_07440 WN55_05958 WN55_05958 WN55_05607 WN55_05607 WN55_05342 WN55_05342 WN55_04119 WN55_04119 WN55_04111 WN55_04111 WN55_02326 WN55_02326 WN55_02596 WN55_02596 WN55_01857 WN55_01857 WN55_01625 WN55_01625 WN55_00515 WN55_00515 WN55_11531 WN55_11531 WN55_00241 WN55_00241 WN55_11342 WN55_11342 WN55_09987 WN55_09987 WN55_08558 WN55_08558 WN55_08209 WN55_08209 WN55_08214 WN55_08214 WN55_10277 WN55_10277 WN55_07947 WN55_07947 WN55_07583 WN55_07583 WN55_04776 WN55_04776 WN55_05401 WN55_05401 WN55_00675 WN55_00675 WN55_09772 WN55_09772 WN55_02699 WN55_02699 WN55_09706 WN55_09706 WN55_09594 WN55_09594 WN55_03487 WN55_03487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WN55_03411Cyclin-related protein FAM58A; Belongs to the cyclin family. (271 aa)
WN55_03088Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (213 aa)
WN55_07416Syntaxin-8. (246 aa)
WN55_07369Syntaxin-18. (324 aa)
WN55_07440Vesicle transport through interaction with t-SNAREs like protein 1A. (219 aa)
WN55_05958Integrator complex subunit 12. (241 aa)
WN55_05607Syntaxin-1B. (196 aa)
WN55_05342Syntaxin-6; Belongs to the syntaxin family. (302 aa)
WN55_04119Citron Rho-interacting kinase. (1632 aa)
WN55_04111Golgi SNAP receptor complex member 1. (220 aa)
WN55_02326Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (229 aa)
WN55_02596Vesicle transport protein USE1. (252 aa)
WN55_01857Uncharacterized protein. (206 aa)
WN55_01625Vesicle transport protein SEC20. (227 aa)
WN55_00515Synaptobrevin. (138 aa)
WN55_11531Syntaxin-16; Belongs to the syntaxin family. (325 aa)
WN55_00241Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1. (477 aa)
WN55_11342Synaptobrevin like protein YKT6; Belongs to the synaptobrevin family. (200 aa)
WN55_09987Integrator complex subunit 12. (304 aa)
WN55_08558Uncharacterized protein. (353 aa)
WN55_08209mTERF domain-containing protein 1, mitochondrial. (333 aa)
WN55_08214Syntaxin-1A; Belongs to the syntaxin family. (470 aa)
WN55_10277Synaptosomal-associated protein; Belongs to the SNAP-25 family. (276 aa)
WN55_07947BET1 like protein. (113 aa)
WN55_07583Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
WN55_04776Synaptobrevin. (122 aa)
WN55_05401Synaptosomal-associated protein 29. (263 aa)
WN55_00675Syntaxin-5; Belongs to the syntaxin family. (366 aa)
WN55_09772Histone chaperone asf1. (198 aa)
WN55_02699Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (221 aa)
WN55_09706Syntaxin-17. (301 aa)
WN55_09594Syntaxin-12; Belongs to the syntaxin family. (271 aa)
WN55_03487Metal-response element-binding transcription factor 2. (824 aa)
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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