STRINGSTRING
yfcA_1 yfcA_1 argE argE fgd1_3 fgd1_3 ywrD_1 ywrD_1 GCA_001049355_04251 GCA_001049355_04251 ssuC_1 ssuC_1 ssuB_2 ssuB_2 ssuB_3 ssuB_3 GCA_001049355_04815 GCA_001049355_04815 ssuC_4 ssuC_4 ssuB_1 ssuB_1 tauA tauA cmpB_1 cmpB_1 GCA_001049355_05206 GCA_001049355_05206 ssuB_4 ssuB_4 cmpB_2 cmpB_2 cmpB_3 cmpB_3 GCA_001049355_05332 GCA_001049355_05332 ssuB_6 ssuB_6 ssuC_5 ssuC_5 ssuA ssuA ntaA_3 ntaA_3 GCA_001049355_05712 GCA_001049355_05712 ssuC_3 ssuC_3 ssuC_2 ssuC_2 cmpD cmpD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yfcA_1Unannotated protein. (252 aa)
argEUnannotated protein. (373 aa)
fgd1_3Unannotated protein. (335 aa)
ywrD_1Unannotated protein. (511 aa)
GCA_001049355_04251Unannotated protein. (329 aa)
ssuC_1Unannotated protein. (270 aa)
ssuB_2Unannotated protein. (262 aa)
ssuB_3Unannotated protein. (273 aa)
GCA_001049355_04815Unannotated protein. (344 aa)
ssuC_4Unannotated protein. (293 aa)
ssuB_1Unannotated protein. (266 aa)
tauAUnannotated protein. (344 aa)
cmpB_1Unannotated protein. (292 aa)
GCA_001049355_05206Unannotated protein. (334 aa)
ssuB_4Unannotated protein. (259 aa)
cmpB_2Unannotated protein. (284 aa)
cmpB_3Unannotated protein. (263 aa)
GCA_001049355_05332Unannotated protein. (291 aa)
ssuB_6Unannotated protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (251 aa)
ssuC_5Unannotated protein. (291 aa)
ssuAUnannotated protein. (355 aa)
ntaA_3Unannotated protein. (454 aa)
GCA_001049355_05712Unannotated protein. (347 aa)
ssuC_3Unannotated protein. (278 aa)
ssuC_2Unannotated protein. (281 aa)
cmpDUnannotated protein. (255 aa)
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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