STRINGSTRING
gltX_1 gltX_1 valS valS cysH cysH GCA_001049355_03140 GCA_001049355_03140 GCA_001049355_03136 GCA_001049355_03136 GCA_001049355_03131 GCA_001049355_03131 GCA_001049355_03112 GCA_001049355_03112 GCA_001049355_03129 GCA_001049355_03129 GCA_001049355_03109 GCA_001049355_03109 GCA_001049355_03110 GCA_001049355_03110 guaA_1 guaA_1 trpS trpS GCA_001049355_00239 GCA_001049355_00239 asnB_1 asnB_1 phrA phrA coaD coaD mnmA mnmA etfA etfA etfB etfB GCA_001049355_01256 GCA_001049355_01256 tyrS tyrS argG argG GCA_001049355_01331 GCA_001049355_01331 leuS leuS mshC mshC GCA_001049355_01784 GCA_001049355_01784 asnB_2 asnB_2 cysD_1 cysD_1 GCA_001049355_02667 GCA_001049355_02667 GCA_001049355_02696 GCA_001049355_02696 metG metG kdpD kdpD GCA_001049355_03052 GCA_001049355_03052 panC panC gabP gabP tilS tilS argS argS gltX_2 gltX_2 GCA_001049355_05275 GCA_001049355_05275 ribF ribF GCA_001049355_04740 GCA_001049355_04740 GCA_001049355_04687 GCA_001049355_04687 cysS cysS ileS ileS cysD_2 cysD_2 nadD nadD nadE nadE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gltX_1Unannotated protein; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (497 aa)
valSUnannotated protein; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (894 aa)
cysHUnannotated protein; Reduction of activated sulfate into sulfite. (235 aa)
GCA_001049355_03140Unannotated protein. (283 aa)
GCA_001049355_03136Unannotated protein. (298 aa)
GCA_001049355_03131Unannotated protein. (291 aa)
GCA_001049355_03112Unannotated protein. (294 aa)
GCA_001049355_03129Unannotated protein. (293 aa)
GCA_001049355_03109Unannotated protein. (290 aa)
GCA_001049355_03110Unannotated protein. (298 aa)
guaA_1Unannotated protein; Catalyzes the synthesis of GMP from XMP. (519 aa)
trpSUnannotated protein; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (340 aa)
GCA_001049355_00239Unannotated protein. (286 aa)
asnB_1Unannotated protein. (601 aa)
phrAUnannotated protein; Belongs to the DNA photolyase family. (444 aa)
coaDUnannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (160 aa)
mnmAUnannotated protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (357 aa)
etfAUnannotated protein. (318 aa)
etfBUnannotated protein. (263 aa)
GCA_001049355_01256Unannotated protein. (513 aa)
tyrSUnannotated protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (429 aa)
argGUnannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (400 aa)
GCA_001049355_01331Unannotated protein. (147 aa)
leuSUnannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (944 aa)
mshCUnannotated protein; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. (429 aa)
GCA_001049355_01784Unannotated protein. (129 aa)
asnB_2Unannotated protein. (651 aa)
cysD_1Unannotated protein. (306 aa)
GCA_001049355_02667Unannotated protein. (150 aa)
GCA_001049355_02696Unannotated protein. (162 aa)
metGUnannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. (517 aa)
kdpDUnannotated protein. (838 aa)
GCA_001049355_03052Unannotated protein. (295 aa)
panCUnannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (314 aa)
gabPUnannotated protein. (605 aa)
tilSUnannotated protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (319 aa)
argSUnannotated protein. (550 aa)
gltX_2Unannotated protein. (294 aa)
GCA_001049355_05275Unannotated protein. (272 aa)
ribFUnannotated protein; Belongs to the ribF family. (324 aa)
GCA_001049355_04740Unannotated protein. (295 aa)
GCA_001049355_04687Unannotated protein. (214 aa)
cysSUnannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (463 aa)
ileSUnannotated protein; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1038 aa)
cysD_2Unannotated protein. (309 aa)
nadDUnannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (204 aa)
nadEUnannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (681 aa)
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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