(13 nodes) glycerol-3-phosphate transmembrane transport, and ABC-type carbohydrate transporter activity network (Yangia sp. CCBMM3)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANT61767.1	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	ugpC	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (357 aa)
	ugpE	Glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (280 aa)
	ANT61770.1	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	ANT61771.1	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
	ANT62157.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (341 aa)
	ANT62158.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
	ANT62159.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
	ANT62160.1	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
	ANT62680.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (439 aa)
	ANT62681.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (337 aa)
	ANT62682.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (281 aa)
	ANT62683.1	Sugar-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)

Your Current Organism:

Yangia sp. CCBMM3

NCBI taxonomy Id: 1792508
Other names: Y. sp. CCB-MM3, Yangia sp. CCB-MM3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANT61767.1	ANT61770.1	AYJ57_14910	AYJ57_14925	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
ANT61767.1	ANT61771.1	AYJ57_14910	AYJ57_14930	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
ANT61767.1	ugpC	AYJ57_14910	AYJ57_14915	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.774
ANT61767.1	ugpE	AYJ57_14910	AYJ57_14920	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.854
ANT61770.1	ANT61767.1	AYJ57_14925	AYJ57_14910	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
ANT61770.1	ANT61771.1	AYJ57_14925	AYJ57_14930	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
ANT61770.1	ANT62157.1	AYJ57_14925	AYJ57_17150	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.734
ANT61770.1	ANT62158.1	AYJ57_14925	AYJ57_17155	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
ANT61770.1	ANT62160.1	AYJ57_14925	AYJ57_17165	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bicyclomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
ANT61770.1	ANT62680.1	AYJ57_14925	AYJ57_20105	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.425
ANT61770.1	ANT62681.1	AYJ57_14925	AYJ57_20110	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.736
ANT61770.1	ANT62682.1	AYJ57_14925	AYJ57_20115	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.850
ANT61770.1	ugpC	AYJ57_14925	AYJ57_14915	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.992
ANT61770.1	ugpE	AYJ57_14925	AYJ57_14920	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.	0.993
ANT61771.1	ANT61767.1	AYJ57_14930	AYJ57_14910	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
ANT61771.1	ANT61770.1	AYJ57_14930	AYJ57_14925	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol-3-phosphate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
ANT61771.1	ANT62157.1	AYJ57_14930	AYJ57_17150	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.424
ANT61771.1	ANT62158.1	AYJ57_14930	AYJ57_17155	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
ANT61771.1	ANT62159.1	AYJ57_14930	AYJ57_17160	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
ANT61771.1	ANT62681.1	AYJ57_14930	AYJ57_20110	Glycerol 3-phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.424