STRINGSTRING
AFZ08338.1 AFZ08338.1 AFZ09307.1 AFZ09307.1 AFZ09305.1 AFZ09305.1 AFZ07875.1 AFZ07875.1 AFZ06691.1 AFZ06691.1 AFZ06489.1 AFZ06489.1 AFZ06432.1 AFZ06432.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFZ08338.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:alr1669 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (229 aa)
AFZ09307.1Polysaccharide deacetylase; PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; InterPro IPR002509; KEGG: fps:FP1633 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Probable polysaccharide deacetylase. (258 aa)
AFZ09305.1PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: ana:alr4278 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (308 aa)
AFZ07875.1PFAM: Sulfotransferase domain; Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR000863:IPR002509; KEGG: cyj:Cyan7822_1994 family 2 glycosyl transferase; PFAM: Polysaccharide deacetylase; Sulfotransferase domain; SPTR: Putative uncharacterized protein. (805 aa)
AFZ06691.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:all4345 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (311 aa)
AFZ06489.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ava:Ava_4797 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Putative uncharacterized protein. (298 aa)
AFZ06432.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: syp:SYNPCC7002_A1994 polysaccharide deacetylase domain-containing protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain containing protein. (233 aa)
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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