STRINGSTRING
AFZ05368.1 AFZ05368.1 AFZ10127.1 AFZ10127.1 AFZ09307.1 AFZ09307.1 AFZ09305.1 AFZ09305.1 AFZ08338.1 AFZ08338.1 AFZ07875.1 AFZ07875.1 AFZ07178.1 AFZ07178.1 AFZ06691.1 AFZ06691.1 AFZ06489.1 AFZ06489.1 AFZ06432.1 AFZ06432.1 AFZ05719.1 AFZ05719.1 AFZ05235.1 AFZ05235.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFZ05368.1KEGG: cyc:PCC7424_1131 hypothetical protein; SPTR: Putative uncharacterized protein. (498 aa)
AFZ10127.1PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF3536); COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: naz:Aazo_2438 family 57 glycoside hydrolase; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Putative uncharacterized protein. (923 aa)
AFZ09307.1Polysaccharide deacetylase; PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; InterPro IPR002509; KEGG: fps:FP1633 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Probable polysaccharide deacetylase. (258 aa)
AFZ09305.1PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: ana:alr4278 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (308 aa)
AFZ08338.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:alr1669 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (229 aa)
AFZ07875.1PFAM: Sulfotransferase domain; Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR000863:IPR002509; KEGG: cyj:Cyan7822_1994 family 2 glycosyl transferase; PFAM: Polysaccharide deacetylase; Sulfotransferase domain; SPTR: Putative uncharacterized protein. (805 aa)
AFZ07178.1PFAM: Glycosyl hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: ana:alr1310 hypothetical protein; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Alr1310 protein. (748 aa)
AFZ06691.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:all4345 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase. (311 aa)
AFZ06489.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ava:Ava_4797 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Putative uncharacterized protein. (298 aa)
AFZ06432.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: syp:SYNPCC7002_A1994 polysaccharide deacetylase domain-containing protein; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain containing protein. (233 aa)
AFZ05719.1PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57; COGs: COG1543 conserved hypothetical protein; InterPro IPR004300:IPR015293; KEGG: tel:tll1974 hypothetical protein; PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; SPTR: Glycoside hydrolase family protein. (529 aa)
AFZ05235.1Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; COGs: COG0383 Alpha-mannosidase; InterPro IPR000602:IPR015341:IPR011682; KEGG: npu:Npun_F4313 glycosyl hydrolase 38 protein; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, core; Glycoside hydrolase, family 38, central domain; PRIAM: Alpha-mannosidase; SMART: Glycoside hydrolase, family 38, central domain; SPTR: Glycosyl hydrolase 38 domain protein. (1283 aa)
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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