42 items (Mycolicibacterium senegalense) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ppsE	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	pks2_2	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2093 aa)
	inhA	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	fabG1_1	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	lgrD_1	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1161 aa)
	fadD9	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1156 aa)
	lgrD_4	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2565 aa)
	KLO51196.1	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
	mbtL_3	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)
	KLO51484.1	fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
	accC	acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)
	kasB_2	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (415 aa)
	KLO52544.1	acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
	eryA_3	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3687 aa)
	fadK_5	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
	lgrD_2	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2579 aa)
	KLO54900.1	Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
	fadD32	fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)
	pks13	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1810 aa)
	accD5_3	methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
	mbtH_1	Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
	pks2_1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2107 aa)
	KLO54994.1	acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
	accD3	acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
	KLO53896.1	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
	ephD	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
	fabD	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	kasA	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (416 aa)
	kasB_1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (417 aa)
	mbtH_2	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (72 aa)
	mbtG	Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	mbtF	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1476 aa)
	dhbF_3	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1817 aa)
	eryA_2	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (997 aa)
	eryA_1	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (448 aa)
	mbtB_3	Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	mbtB_2	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	mbtB_1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1181 aa)
	ppsA_2	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1718 aa)
	KLO48759.1	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3080 aa)
	KLO48800.1	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
	KLO48885.1	fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)

Your Current Organism:

Mycolicibacterium senegalense

NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLO48759.1	KLO48800.1	ABW05_29540	ABW05_29770	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KLO48759.1	KLO48885.1	ABW05_29540	ABW05_30275	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KLO48759.1	KLO51196.1	ABW05_29540	ABW05_06420	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KLO48759.1	KLO51484.1	ABW05_29540	ABW05_08110	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KLO48759.1	KLO52544.1	ABW05_29540	ABW05_14525	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KLO48759.1	KLO53896.1	ABW05_29540	ABW05_22835	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KLO48759.1	KLO54900.1	ABW05_29540	ABW05_16855	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KLO48759.1	KLO54994.1	ABW05_29540	ABW05_20010	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KLO48759.1	accC	ABW05_29540	ABW05_08405	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
KLO48759.1	accD3	ABW05_29540	ABW05_21345	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KLO48759.1	accD5_3	ABW05_29540	ABW05_17580	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
KLO48759.1	dhbF_3	ABW05_29540	ABW05_28505	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
KLO48759.1	ephD	ABW05_29540	ABW05_27660	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KLO48759.1	eryA_1	ABW05_29540	ABW05_28515	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.956
KLO48759.1	eryA_2	ABW05_29540	ABW05_28510	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KLO48759.1	eryA_3	ABW05_29540	ABW05_14545	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KLO48759.1	fabD	ABW05_29540	ABW05_27895	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
KLO48759.1	fabG1_1	ABW05_29540	ABW05_02835	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
KLO48759.1	fadD32	ABW05_29540	ABW05_17570	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KLO48759.1	fadD9	ABW05_29540	ABW05_03740	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983

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