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gltB_1 gltB_1 gltD gltD gltB_2 gltB_2 KLO51002.1 KLO51002.1 fprA_3 fprA_3 fprA_4 fprA_4 icd2 icd2 aspC_2 aspC_2 fprA_1 fprA_1 gdh gdh gltB_3 gltB_3 gltD-2 gltD-2 fprB_1 fprB_1 gdhA gdhA glnA_2 glnA_2 KLO48663.1 KLO48663.1 KLO48664.1 KLO48664.1 gdhB_1 gdhB_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gltB_1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (515 aa)
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
gltB_2Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1522 aa)
KLO51002.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (495 aa)
fprA_3Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)
fprA_4NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
icd2Isocitrate dehydrogenase; NADP-specific, catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family. (746 aa)
aspC_2Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
fprA_14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
gdhNAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1068 aa)
gltB_3Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1526 aa)
gltD-2Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
fprB_1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)
gdhAConverts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (449 aa)
glnA_2Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
KLO48663.12-oxoacid:ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
KLO48664.12-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)
gdhB_1NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1617 aa)
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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