8 items (Mycolicibacterium senegalense) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

Predicted Interactions

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Others

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protein homology

Your Input:
	papA1	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
	papA2	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	lgrD_4	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2565 aa)
	lgrD_2	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2579 aa)
	lgrD_3	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (3441 aa)
	mbtF	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1476 aa)
	dhbF_3	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1817 aa)
	mbtB_1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1181 aa)

Your Current Organism:

Mycolicibacterium senegalense

NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dhbF_3	lgrD_2	ABW05_28505	ABW05_15880	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
dhbF_3	lgrD_4	ABW05_28505	ABW05_06275	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
dhbF_3	mbtB_1	ABW05_28505	ABW05_28530	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
dhbF_3	mbtF	ABW05_28505	ABW05_28500	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
lgrD_2	dhbF_3	ABW05_15880	ABW05_28505	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
lgrD_2	lgrD_3	ABW05_15880	ABW05_15885	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.949
lgrD_2	lgrD_4	ABW05_15880	ABW05_06275	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
lgrD_2	mbtB_1	ABW05_15880	ABW05_28530	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
lgrD_2	mbtF	ABW05_15880	ABW05_28500	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
lgrD_2	papA2	ABW05_15880	ABW05_02770	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
lgrD_3	lgrD_2	ABW05_15885	ABW05_15880	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
lgrD_3	lgrD_4	ABW05_15885	ABW05_06275	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
lgrD_3	mbtB_1	ABW05_15885	ABW05_28530	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747
lgrD_4	dhbF_3	ABW05_06275	ABW05_28505	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
lgrD_4	lgrD_2	ABW05_06275	ABW05_15880	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
lgrD_4	lgrD_3	ABW05_06275	ABW05_15885	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.787
lgrD_4	mbtB_1	ABW05_06275	ABW05_28530	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
lgrD_4	mbtF	ABW05_06275	ABW05_28500	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.836
lgrD_4	papA2	ABW05_06275	ABW05_02770	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
mbtB_1	dhbF_3	ABW05_28530	ABW05_28505	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885

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