6 items (Mycolicibacterium senegalense) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fabD	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	eryA_2	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (997 aa)
	pks2_2	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2093 aa)
	eryA_3	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3687 aa)
	pks13	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1810 aa)
	pks2_1	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2107 aa)

Your Current Organism:

Mycolicibacterium senegalense

NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
eryA_2	eryA_3	ABW05_28510	ABW05_14545	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_2	fabD	ABW05_28510	ABW05_27895	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_2	pks13	ABW05_28510	ABW05_17575	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
eryA_2	pks2_1	ABW05_28510	ABW05_20005	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_2	pks2_2	ABW05_28510	ABW05_02775	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_3	eryA_2	ABW05_14545	ABW05_28510	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_3	fabD	ABW05_14545	ABW05_27895	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
eryA_3	pks13	ABW05_14545	ABW05_17575	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
eryA_3	pks2_1	ABW05_14545	ABW05_20005	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
eryA_3	pks2_2	ABW05_14545	ABW05_02775	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
fabD	eryA_2	ABW05_27895	ABW05_28510	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
fabD	eryA_3	ABW05_27895	ABW05_14545	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
fabD	pks13	ABW05_27895	ABW05_17575	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
fabD	pks2_1	ABW05_27895	ABW05_20005	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
fabD	pks2_2	ABW05_27895	ABW05_02775	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
pks13	eryA_2	ABW05_17575	ABW05_28510	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
pks13	eryA_3	ABW05_17575	ABW05_14545	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
pks13	fabD	ABW05_17575	ABW05_27895	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
pks13	pks2_1	ABW05_17575	ABW05_20005	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
pks13	pks2_2	ABW05_17575	ABW05_02775	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999

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