STRINGSTRING
glmS_1 glmS_1 asnB_2 asnB_2 ggtB ggtB prcB prcB asnB_1 asnB_1 gltB_2 gltB_2 egtC_2 egtC_2 KLO53068.1 KLO53068.1 prcA prcA egtC_1 egtC_1 purF purF glmS_2 glmS_2 gltB_3 gltB_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glmS_1Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (625 aa)
asnB_2Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
ggtBGamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
prcBProteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (286 aa)
asnB_1Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
gltB_2Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1522 aa)
egtC_2Amidohydrolase; Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine. (230 aa)
KLO53068.1Choloylglycine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
prcAProteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (243 aa)
egtC_1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (511 aa)
glmS_2Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
gltB_3Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1526 aa)
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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