STRINGSTRING
AMR78144.1 AMR78144.1 AMR80351.1 AMR80351.1 AMR79127.1 AMR79127.1 AMR79128.1 AMR79128.1 AMR79129.1 AMR79129.1 AMR79543.1 AMR79543.1 AMR79544.1 AMR79544.1 AMR79545.1 AMR79545.1 msrQ msrQ msrP msrP AMR80059.1 AMR80059.1 AMR80060.1 AMR80060.1 AMR80406.1 AMR80406.1 AMR82447.1 AMR82447.1 AMR81999.1 AMR81999.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMR78144.1RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (244 aa)
AMR80351.1Sugar dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
AMR79127.1Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
AMR79128.1RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa)
AMR79129.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AMR79543.1Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
AMR79544.1RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (199 aa)
AMR79545.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
msrQSulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...] (227 aa)
msrPMononuclear molybdenum enzyme YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bot [...] (333 aa)
AMR80059.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
AMR80060.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
AMR80406.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
AMR82447.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
AMR81999.1RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (197 aa)
Your Current Organism:
Cupriavidus nantongensis
NCBI taxonomy Id: 1796606
Other names: C. nantongensis, Cupriavidus nantongensis Sun et al. 2016, Cupriavidus sp. X1, KCTC 42909, LMG 29218, LMG:29218, strain X1
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