STRINGSTRING
AMR80232.1 AMR80232.1 AMR77370.1 AMR77370.1 AMR77371.1 AMR77371.1 nuoH nuoH atpB atpB AMR76650.1 AMR76650.1 AMR76720.1 AMR76720.1 AMR76762.1 AMR76762.1 AMR80547.1 AMR80547.1 AMR76763.1 AMR76763.1 AMR76764.1 AMR76764.1 AMR76766.1 AMR76766.1 AMR76770.1 AMR76770.1 ctaB ctaB AMR80170.1 AMR80170.1 AMR76783.1 AMR76783.1 AMR76786.1 AMR76786.1 AMR77376.1 AMR77376.1 AMR77377.1 AMR77377.1 nuoN nuoN AMR77386.1 AMR77386.1 AMR80233.1 AMR80233.1 nuoI nuoI AMR77387.1 AMR77387.1 AMR77388.1 AMR77388.1 AMR77520.1 AMR77520.1 AMR77840.1 AMR77840.1 ppk ppk AMR78365.1 AMR78365.1 AMR78425.1 AMR78425.1 AMR78426.1 AMR78426.1 AMR78427.1 AMR78427.1 rbfA rbfA AMR82115.1 AMR82115.1 AMR82114.1 AMR82114.1 AMR82113.1 AMR82113.1 AMR82112.1 AMR82112.1 AMR82445.1 AMR82445.1 AMR81927.1 AMR81927.1 AMR81692.1 AMR81692.1 AMR81691.1 AMR81691.1 AMR76342.1 AMR76342.1 atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH atpF atpF AMR78948.1 AMR78948.1 AMR78949.1 AMR78949.1 AMR80548.1 AMR80548.1 AMR78950.1 AMR78950.1 AMR78951.1 AMR78951.1 AMR78952.1 AMR78952.1 ppk-2 ppk-2 sdhB sdhB AMR79190.1 AMR79190.1 AMR79191.1 AMR79191.1 AMR80357.1 AMR80357.1 AMR79358.1 AMR79358.1 AMR80012.1 AMR80012.1 AMR80013.1 AMR80013.1 AMR80014.1 AMR80014.1 AMR76964.1 AMR76964.1 ppa ppa AMR77256.1 AMR77256.1 AMR81690.1 AMR81690.1 AMR81689.1 AMR81689.1 AMR81688.1 AMR81688.1 AMR81416.1 AMR81416.1 AMR81415.1 AMR81415.1 AMR81014.1 AMR81014.1 AMR80550.1 AMR80550.1 AMR80549.1 AMR80549.1 AMR77374.1 AMR77374.1 nuoK nuoK nuoA nuoA nuoB nuoB nuoC nuoC nuoD nuoD atpE atpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMR80232.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
AMR77370.1NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (431 aa)
AMR77371.1NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (787 aa)
nuoHNADH:ubiquinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (354 aa)
atpBF0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (288 aa)
AMR76650.1Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
AMR76720.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
AMR76762.1Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (425 aa)
AMR80547.1Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa)
AMR76763.1Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (535 aa)
AMR76764.1Involved in the insertion of copper into subunit I of cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
AMR76766.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
AMR76770.1Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (314 aa)
AMR80170.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (486 aa)
AMR76783.1Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
AMR76786.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
AMR77376.1NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (695 aa)
AMR77377.1NADH:ubiquinone oxidoreductase subunit M; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
nuoNNADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (491 aa)
AMR77386.1Cytochrome ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
AMR80233.1Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (657 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
AMR77387.1Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
AMR77388.1Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
AMR77520.1Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
AMR77840.1Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ppkRNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (700 aa)
AMR78365.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (201 aa)
AMR78425.1Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
AMR78426.1Na+/H+ antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AMR78427.1Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology. (934 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (123 aa)
AMR82115.1Cytochrome ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
AMR82114.1Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (667 aa)
AMR82113.1Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
AMR82112.1Cytochrome o ubiquinol oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AMR82445.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
AMR81927.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
AMR81692.1Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
AMR81691.1Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (585 aa)
AMR76342.1Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
atpCF0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (138 aa)
atpDF0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (467 aa)
atpGF0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (291 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa)
atpHF0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (181 aa)
atpFF0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
AMR78948.1Cytochrome oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (305 aa)
AMR78949.1Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
AMR80548.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
AMR78950.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AMR78951.1Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (482 aa)
AMR78952.1Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. (48 aa)
ppk-2RNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (695 aa)
sdhBPart of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
AMR79190.1Fumarate reductase (quinol) flavoprotein subunit; Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD- [...] (592 aa)
AMR79191.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AMR80357.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
AMR79358.1Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
AMR80012.1Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
AMR80013.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (467 aa)
AMR80014.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (205 aa)
AMR76964.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)
ppaInorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. (175 aa)
AMR77256.1Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
AMR81690.1Bb3-type cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AMR81689.1Bb3-type cytochrome oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AMR81688.1Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
AMR81416.1Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AMR81415.1Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology. (477 aa)
AMR81014.1Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
AMR80550.1Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
AMR80549.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
AMR77374.1NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (214 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
nuoANADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (119 aa)
nuoBNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (160 aa)
nuoCNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (199 aa)
nuoDNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa)
atpEF0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (88 aa)
Your Current Organism:
Cupriavidus nantongensis
NCBI taxonomy Id: 1796606
Other names: C. nantongensis, Cupriavidus nantongensis Sun et al. 2016, Cupriavidus sp. X1, KCTC 42909, LMG 29218, LMG:29218, strain X1
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