Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMR78407.1 | AMR80667.1 | A2G96_12045 | A2G96_22770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.948 |
| AMR78407.1 | AMR80668.1 | A2G96_12045 | A2G96_22775 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| AMR78407.1 | AMR80669.1 | A2G96_12045 | A2G96_22780 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.528 |
| AMR78407.1 | AMR80671.1 | A2G96_12045 | A2G96_22790 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.985 |
| AMR79368.1 | AMR80667.1 | A2G96_17405 | A2G96_22770 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.593 |
| AMR79368.1 | AMR80668.1 | A2G96_17405 | A2G96_22775 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| AMR79368.1 | AMR80669.1 | A2G96_17405 | A2G96_22780 | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.935 |
| AMR79815.1 | AMR80667.1 | A2G96_19760 | A2G96_22770 | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| AMR79815.1 | AMR80668.1 | A2G96_19760 | A2G96_22775 | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| AMR80667.1 | AMR78407.1 | A2G96_22770 | A2G96_12045 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.948 |
| AMR80667.1 | AMR79368.1 | A2G96_22770 | A2G96_17405 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.593 |
| AMR80667.1 | AMR79815.1 | A2G96_22770 | A2G96_19760 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.546 |
| AMR80667.1 | AMR80668.1 | A2G96_22770 | A2G96_22775 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
| AMR80667.1 | AMR80669.1 | A2G96_22770 | A2G96_22780 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.932 |
| AMR80667.1 | AMR80670.1 | A2G96_22770 | A2G96_22785 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.974 |
| AMR80667.1 | AMR80671.1 | A2G96_22770 | A2G96_22790 | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.994 |
| AMR80668.1 | AMR78407.1 | A2G96_22775 | A2G96_12045 | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.947 |
| AMR80668.1 | AMR79368.1 | A2G96_22775 | A2G96_17405 | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.952 |
| AMR80668.1 | AMR79815.1 | A2G96_22775 | A2G96_19760 | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. | 0.942 |
| AMR80668.1 | AMR80667.1 | A2G96_22775 | A2G96_22770 | 4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.970 |
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