STRINGSTRING
AMR76806.1 AMR76806.1 AMR76271.1 AMR76271.1 AMR76274.1 AMR76274.1 AMR76275.1 AMR76275.1 AMR76276.1 AMR76276.1 AMR76277.1 AMR76277.1 AMR76278.1 AMR76278.1 AMR76279.1 AMR76279.1 AMR80115.1 AMR80115.1 AMR76281.1 AMR76281.1 AMR80116.1 AMR80116.1 AMR76282.1 AMR76282.1 AMR76297.1 AMR76297.1 yidC yidC AMR76492.1 AMR76492.1 AMR76494.1 AMR76494.1 AMR76606.1 AMR76606.1 AMR76674.1 AMR76674.1 AMR76750.1 AMR76750.1 secB secB ftsY ftsY AMR76826.1 AMR76826.1 AMR76827.1 AMR76827.1 AMR76828.1 AMR76828.1 AMR77098.1 AMR77098.1 AMR77235.1 AMR77235.1 AMR77291.1 AMR77291.1 AMR77304.1 AMR77304.1 AMR77365.1 AMR77365.1 ftsB ftsB AMR77752.1 AMR77752.1 AMR77754.1 AMR77754.1 AMR80265.1 AMR80265.1 AMR77873.1 AMR77873.1 AMR77935.1 AMR77935.1 AMR77936.1 AMR77936.1 AMR77937.1 AMR77937.1 AMR78022.1 AMR78022.1 AMR78026.1 AMR78026.1 AMR78027.1 AMR78027.1 AMR78030.1 AMR78030.1 AMR80310.1 AMR80310.1 AMR78577.1 AMR78577.1 AMR78580.1 AMR78580.1 AMR78613.1 AMR78613.1 AMR78616.1 AMR78616.1 AMR78617.1 AMR78617.1 AMR78619.1 AMR78619.1 AMR78655.1 AMR78655.1 AMR78859.1 AMR78859.1 clpB clpB AMR79216.1 AMR79216.1 AMR80369.1 AMR80369.1 AMR79307.1 AMR79307.1 AMR79313.1 AMR79313.1 AMR79488.1 AMR79488.1 AMR80380.1 AMR80380.1 AMR79489.1 AMR79489.1 AMR79491.1 AMR79491.1 AMR79494.1 AMR79494.1 AMR79501.1 AMR79501.1 AMR79516.1 AMR79516.1 clpA clpA yajC yajC secD secD secF secF ffh ffh AMR79864.1 AMR79864.1 AMR79876.1 AMR79876.1 AMR79877.1 AMR79877.1 AMR79878.1 AMR79878.1 secA secA AMR79997.1 AMR79997.1 tatC tatC tatB tatB tatA tatA AMR80049.1 AMR80049.1 AMR80052.1 AMR80052.1 AMR80053.1 AMR80053.1 secY secY secE secE AMR80430.1 AMR80430.1 AMR80432.1 AMR80432.1 AMR80450.1 AMR80450.1 AMR80585.1 AMR80585.1 AMR80598.1 AMR80598.1 AMR80603.1 AMR80603.1 AMR81318.1 AMR81318.1 AMR81356.1 AMR81356.1 AMR81440.1 AMR81440.1 AMR81445.1 AMR81445.1 AMR81453.1 AMR81453.1 AMR81454.1 AMR81454.1 AMR81458.1 AMR81458.1 AMR82378.1 AMR82378.1 AMR81462.1 AMR81462.1 AMR81464.1 AMR81464.1 AMR81465.1 AMR81465.1 AMR81781.1 AMR81781.1 AMR81782.1 AMR81782.1 AMR82425.1 AMR82425.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMR76806.1LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
AMR76271.1General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
AMR76274.1Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
AMR76275.1Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
AMR76276.1Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
AMR76277.1General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
AMR76278.1General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
AMR76279.1General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
AMR80115.1General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AMR76281.1Type II secretion system protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)
AMR80116.1Type II secretion system protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (491 aa)
AMR76282.1Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
AMR76297.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (962 aa)
yidCMembrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (556 aa)
AMR76492.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (837 aa)
AMR76494.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (965 aa)
AMR76606.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family. (149 aa)
AMR76674.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (650 aa)
AMR76750.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1017 aa)
secBProtein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (173 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (389 aa)
AMR76826.1General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AMR76827.1Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AMR76828.1Pilus assembly protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
AMR77098.1Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
AMR77235.1Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
AMR77291.1Late control protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
AMR77304.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (186 aa)
AMR77365.1Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (125 aa)
ftsBCell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. (113 aa)
AMR77752.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (718 aa)
AMR77754.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AMR80265.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (725 aa)
AMR77873.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
AMR77935.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (393 aa)
AMR77936.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (779 aa)
AMR77937.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (188 aa)
AMR78022.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (443 aa)
AMR78026.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (391 aa)
AMR78027.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (527 aa)
AMR78030.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (584 aa)
AMR80310.1Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (298 aa)
AMR78577.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (923 aa)
AMR78580.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (158 aa)
AMR78613.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (583 aa)
AMR78616.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (569 aa)
AMR78617.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (369 aa)
AMR78619.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (336 aa)
AMR78655.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
AMR78859.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa)
clpBATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (862 aa)
AMR79216.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
AMR80369.1Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AMR79307.1Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
AMR79313.1Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
AMR79488.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AMR80380.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
AMR79489.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
AMR79491.1Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
AMR79494.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)
AMR79501.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
AMR79516.1Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
clpAATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (764 aa)
yajCPreprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (108 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (623 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (323 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (464 aa)
AMR79864.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
AMR79876.1Type IV-A pilus assembly ATPase PilB; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
AMR79877.1Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
AMR79878.1Methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (307 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (925 aa)
AMR79997.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (961 aa)
tatCTwin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (268 aa)
tatBPreprotein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (173 aa)
tatAPreprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (76 aa)
AMR80049.1Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology. (714 aa)
AMR80052.1Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
AMR80053.1Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (447 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (126 aa)
AMR80430.1Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
AMR80432.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AMR80450.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
AMR80585.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (2029 aa)
AMR80598.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (969 aa)
AMR80603.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (839 aa)
AMR81318.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
AMR81356.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
AMR81440.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1098 aa)
AMR81445.1Type VI secretion protein VasK; Derived by automated computational analysis using gene prediction method: Protein Homology. (1333 aa)
AMR81453.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (933 aa)
AMR81454.1ClpV1 family T6SS ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (909 aa)
AMR81458.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
AMR82378.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
AMR81462.1Type VI secretion system protein ImpK; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
AMR81464.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (332 aa)
AMR81465.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (171 aa)
AMR81781.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (486 aa)
AMR81782.1Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
AMR82425.1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
Your Current Organism:
Cupriavidus nantongensis
NCBI taxonomy Id: 1796606
Other names: C. nantongensis, Cupriavidus nantongensis Sun et al. 2016, Cupriavidus sp. X1, KCTC 42909, LMG 29218, LMG:29218, strain X1
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