(8 nodes) Glycoside hydrolase 97 network (Bacteroides caecimuris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A4V03_00195	Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	ANU59602.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)
	ANU56448.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)
	ANU56900.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (719 aa)
	ANU57107.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)
	ANU58672.1	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)
	ANU59870.1	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
	ANU58697.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)

Your Current Organism:

Bacteroides caecimuris

NCBI taxonomy Id: 1796613
Other names: B. caecimuris, Bacteroides caecimuris Lagkouvardos et al. 2016, Bacteroides sp. I48, DSM 26085, KCTC 15547, strain I48

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANU56448.1	ANU56900.1	A4V03_01745	A4V03_04345	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU56448.1	ANU57107.1	A4V03_01745	A4V03_05630	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU56448.1	ANU58672.1	A4V03_01745	A4V03_14780	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
ANU56448.1	ANU58697.1	A4V03_01745	A4V03_14930	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ANU56448.1	ANU59870.1	A4V03_01745	A4V03_14920	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
ANU56900.1	ANU56448.1	A4V03_04345	A4V03_01745	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU56900.1	ANU57107.1	A4V03_04345	A4V03_05630	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ANU56900.1	ANU58672.1	A4V03_04345	A4V03_14780	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU56900.1	ANU58697.1	A4V03_04345	A4V03_14930	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
ANU56900.1	ANU59870.1	A4V03_04345	A4V03_14920	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANU57107.1	ANU56448.1	A4V03_05630	A4V03_01745	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU57107.1	ANU56900.1	A4V03_05630	A4V03_04345	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
ANU57107.1	ANU58672.1	A4V03_05630	A4V03_14780	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANU57107.1	ANU58697.1	A4V03_05630	A4V03_14930	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
ANU57107.1	ANU59870.1	A4V03_05630	A4V03_14920	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU58672.1	ANU56448.1	A4V03_14780	A4V03_01745	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
ANU58672.1	ANU56900.1	A4V03_14780	A4V03_04345	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
ANU58672.1	ANU57107.1	A4V03_14780	A4V03_05630	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
ANU58672.1	ANU58697.1	A4V03_14780	A4V03_14930	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
ANU58672.1	ANU59870.1	A4V03_14780	A4V03_14920	Retaining alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912