8 items (Blautia sp. YL58) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atpD-2	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (206 aa)
	ANU78049.1	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
	ANU78051.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (649 aa)
	ANU78052.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	ANU78167.1	V-type ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (678 aa)
	ANU78170.1	V-type ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	ANU78171.1	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
	atpD-3	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (227 aa)

Your Current Organism:

Blautia sp. YL58

NCBI taxonomy Id: 1796616
Other names: B. sp. YL58

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANU78049.1	ANU78051.1	A4V09_21290	A4V09_21300	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.997
ANU78049.1	ANU78052.1	A4V09_21290	A4V09_21305	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANU78049.1	ANU78167.1	A4V09_21290	A4V09_21930	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.971
ANU78049.1	ANU78170.1	A4V09_21290	A4V09_21945	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
ANU78049.1	ANU78171.1	A4V09_21290	A4V09_21950	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ANU78049.1	atpD-2	A4V09_21290	A4V09_21270	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.997
ANU78049.1	atpD-3	A4V09_21290	A4V09_21965	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.975
ANU78051.1	ANU78049.1	A4V09_21300	A4V09_21290	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANU78051.1	ANU78052.1	A4V09_21300	A4V09_21305	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
ANU78051.1	ANU78167.1	A4V09_21300	A4V09_21930	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.912
ANU78051.1	ANU78170.1	A4V09_21300	A4V09_21945	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
ANU78051.1	ANU78171.1	A4V09_21300	A4V09_21950	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
ANU78051.1	atpD-2	A4V09_21300	A4V09_21270	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.995
ANU78051.1	atpD-3	A4V09_21300	A4V09_21965	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.977
ANU78052.1	ANU78049.1	A4V09_21305	A4V09_21290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
ANU78052.1	ANU78051.1	A4V09_21305	A4V09_21300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.999
ANU78052.1	ANU78167.1	A4V09_21305	A4V09_21930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.986
ANU78052.1	ANU78170.1	A4V09_21305	A4V09_21945	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ANU78052.1	ANU78171.1	A4V09_21305	A4V09_21950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
ANU78052.1	atpD-2	A4V09_21305	A4V09_21270	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998