10 items (Blautia sp. YL58) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atpG	ATP synthase F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (299 aa)
	atpD-2	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (206 aa)
	atpB-2	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (462 aa)
	atpA-2	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (588 aa)
	ANU78048.1	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
	atpE-2	Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. (197 aa)
	ANU78171.1	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
	atpA-3	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (588 aa)
	atpB-3	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (457 aa)
	atpD-3	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (227 aa)

Your Current Organism:

Blautia sp. YL58

NCBI taxonomy Id: 1796616
Other names: B. sp. YL58

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANU78048.1	ANU78171.1	A4V09_21285	A4V09_21950	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
ANU78048.1	atpA-2	A4V09_21285	A4V09_21280	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.997
ANU78048.1	atpA-3	A4V09_21285	A4V09_21955	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.985
ANU78048.1	atpB-2	A4V09_21285	A4V09_21275	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.997
ANU78048.1	atpB-3	A4V09_21285	A4V09_21960	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.985
ANU78048.1	atpD-2	A4V09_21285	A4V09_21270	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
ANU78048.1	atpD-3	A4V09_21285	A4V09_21965	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.984
ANU78048.1	atpG	A4V09_21285	A4V09_08805	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase F1 subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.	0.416
ANU78171.1	ANU78048.1	A4V09_21950	A4V09_21285	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
ANU78171.1	atpA-2	A4V09_21950	A4V09_21280	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.988
ANU78171.1	atpA-3	A4V09_21950	A4V09_21955	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.997
ANU78171.1	atpB-2	A4V09_21950	A4V09_21275	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.988
ANU78171.1	atpB-3	A4V09_21950	A4V09_21960	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.997
ANU78171.1	atpD-2	A4V09_21950	A4V09_21270	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.971
ANU78171.1	atpD-3	A4V09_21950	A4V09_21965	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	V-type ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
ANU78171.1	atpE-2	A4V09_21950	A4V09_21940	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
atpA-2	ANU78048.1	A4V09_21280	A4V09_21285	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	Archaeal/vacuolar-type H+-ATPase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
atpA-2	ANU78171.1	A4V09_21280	A4V09_21950	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	V-type ATP synthase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
atpA-2	atpA-3	A4V09_21280	A4V09_21955	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.903
atpA-2	atpB-2	A4V09_21280	A4V09_21275	V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	V-type ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.997