STRINGSTRING
OHB43016.1 OHB43016.1 OHB43995.1 OHB43995.1 OHB42693.1 OHB42693.1 OHB42618.1 OHB42618.1 OHB45881.1 OHB45881.1 ligA ligA dnaX dnaX OHB43838.1 OHB43838.1 OHB44169.1 OHB44169.1 OHB42716.1 OHB42716.1 OHB44113.1 OHB44113.1 OHB44539.1 OHB44539.1 OHB43204.1 OHB43204.1 polA polA OHB45339.1 OHB45339.1 A2Y13_11805 A2Y13_11805 OHB45585.1 OHB45585.1 OHB44192.1 OHB44192.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OHB43016.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (300 aa)
OHB43995.1DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (548 aa)
OHB42693.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
OHB42618.1Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
OHB45881.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (423 aa)
ligADNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (664 aa)
dnaXDNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (561 aa)
OHB43838.1DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1154 aa)
OHB44169.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (450 aa)
OHB42716.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (368 aa)
OHB44113.1Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (325 aa)
OHB44539.1DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (368 aa)
OHB43204.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family. (116 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (918 aa)
OHB45339.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (146 aa)
A2Y13_11805Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome. (328 aa)
OHB45585.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (239 aa)
OHB44192.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (430 aa)
Your Current Organism:
Planctomycetes bacterium GWC24544
NCBI taxonomy Id: 1801952
Other names: P. bacterium GWC2_45_44, Planctomycetes bacterium GWC2_45_44
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