STRINGSTRING
OHC09035.1 OHC09035.1 OHC10307.1 OHC10307.1 OHC10309.1 OHC10309.1 OHC10808.1 OHC10808.1 OHC09705.1 OHC09705.1 OHC09976.1 OHC09976.1 OHC09977.1 OHC09977.1 OHC09980.1 OHC09980.1 OHC10236.1 OHC10236.1 OHC09985.1 OHC09985.1 OHC10098.1 OHC10098.1 OHC10259.1 OHC10259.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OHC09035.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
OHC10307.1Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (708 aa)
OHC10309.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (389 aa)
OHC10808.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
OHC09705.1Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
OHC09976.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
OHC09977.1Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. (954 aa)
OHC09980.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (155 aa)
OHC10236.1DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (343 aa)
OHC09985.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
OHC10098.1Post-segregation antitoxin CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
OHC10259.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
Your Current Organism:
Polynucleobacter sp. GWA24521
NCBI taxonomy Id: 1801989
Other names: P. sp. GWA2_45_21, Polynucleobacter sp. GWA2_45_21
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