17 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_25989	PPM-type phosphatase domain-containing protein. (376 aa)
	JCGZ_26194	PPM-type phosphatase domain-containing protein. (433 aa)
	JCGZ_24259	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (355 aa)
	JCGZ_20459	PPM-type phosphatase domain-containing protein. (404 aa)
	JCGZ_13902	Uncharacterized protein. (293 aa)
	JCGZ_18658	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (338 aa)
	JCGZ_12344	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	JCGZ_07637	PPM-type phosphatase domain-containing protein. (546 aa)
	JCGZ_17137	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (338 aa)
	JCGZ_07441	PPM-type phosphatase domain-containing protein. (546 aa)
	JCGZ_04885	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (362 aa)
	JCGZ_07680	Uncharacterized protein. (191 aa)
	JCGZ_12672	Uncharacterized protein. (201 aa)
	JCGZ_04988	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (354 aa)
	JCGZ_24736	PPM-type phosphatase domain-containing protein. (539 aa)
	JCGZ_01392	PPM-type phosphatase domain-containing protein. (420 aa)
	JCGZ_02934	PPM-type phosphatase domain-containing protein. (426 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01392	JCGZ_04885	A0A067L908	A0A067KQ66	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.764
JCGZ_01392	JCGZ_04988	A0A067L908	A0A067KRJ5	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.780
JCGZ_01392	JCGZ_07680	A0A067L908	A0A067KQL2	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.835
JCGZ_01392	JCGZ_12344	A0A067L908	A0A067KA71	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.764
JCGZ_01392	JCGZ_12672	A0A067L908	A0A067KR79	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.884
JCGZ_01392	JCGZ_17137	A0A067L908	A0A067KF14	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.786
JCGZ_01392	JCGZ_18658	A0A067L908	A0A067K3Y9	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.803
JCGZ_01392	JCGZ_24259	A0A067L908	A0A067JMN3	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.780
JCGZ_02934	JCGZ_04885	A0A067LDT9	A0A067KQ66	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.764
JCGZ_02934	JCGZ_04988	A0A067LDT9	A0A067KRJ5	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.780
JCGZ_02934	JCGZ_07680	A0A067LDT9	A0A067KQL2	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.835
JCGZ_02934	JCGZ_12344	A0A067LDT9	A0A067KA71	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.764
JCGZ_02934	JCGZ_12672	A0A067LDT9	A0A067KR79	PPM-type phosphatase domain-containing protein.	Uncharacterized protein.	0.884
JCGZ_02934	JCGZ_17137	A0A067LDT9	A0A067KF14	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.783
JCGZ_02934	JCGZ_18658	A0A067LDT9	A0A067K3Y9	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.826
JCGZ_02934	JCGZ_24259	A0A067LDT9	A0A067JMN3	PPM-type phosphatase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.780
JCGZ_04885	JCGZ_01392	A0A067KQ66	A0A067L908	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.764
JCGZ_04885	JCGZ_02934	A0A067KQ66	A0A067LDT9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.764
JCGZ_04885	JCGZ_07441	A0A067KQ66	A0A067KNK7	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.904
JCGZ_04885	JCGZ_07637	A0A067KQ66	A0A067KCW5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.904