25 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_26033	Uncharacterized protein. (368 aa)
	JCGZ_03319	Uncharacterized protein. (599 aa)
	JCGZ_25332	Uncharacterized protein. (838 aa)
	JCGZ_25891	Uncharacterized protein. (427 aa)
	JCGZ_17740	BURP domain-containing protein. (625 aa)
	JCGZ_25053	Uncharacterized protein. (680 aa)
	JCGZ_16465	Uncharacterized protein. (623 aa)
	JCGZ_20591	Uncharacterized protein. (730 aa)
	JCGZ_21063	Rx_N domain-containing protein. (126 aa)
	JCGZ_11667	Uncharacterized protein. (341 aa)
	JCGZ_12422	Uncharacterized protein. (278 aa)
	JCGZ_19359	Uncharacterized protein. (158 aa)
	JCGZ_08786	OVATE domain-containing protein. (266 aa)
	JCGZ_12420	Uncharacterized protein. (243 aa)
	JCGZ_12022	Uncharacterized protein. (211 aa)
	JCGZ_04998	Uncharacterized protein. (323 aa)
	JCGZ_00713	Uncharacterized protein. (91 aa)
	JCGZ_01059	Uncharacterized protein. (650 aa)
	JCGZ_08235	Uncharacterized protein. (1074 aa)
	JCGZ_02173	FRIGIDA-like protein; Belongs to the Frigida family. (520 aa)
	JCGZ_06613	Uncharacterized protein. (341 aa)
	JCGZ_27002	Uncharacterized protein. (636 aa)
	JCGZ_25196	F-box domain-containing protein. (394 aa)
	JCGZ_05437	Uncharacterized protein. (443 aa)
	JCGZ_07970	Uncharacterized protein. (712 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00713	JCGZ_03319	A0A067KRV6	A0A067JFT4	Uncharacterized protein.	Uncharacterized protein.	0.433
JCGZ_00713	JCGZ_04998	A0A067KRV6	A0A067KRK3	Uncharacterized protein.	Uncharacterized protein.	0.492
JCGZ_00713	JCGZ_07970	A0A067KRV6	A0A067LHU1	Uncharacterized protein.	Uncharacterized protein.	0.497
JCGZ_00713	JCGZ_11667	A0A067KRV6	A0A067K504	Uncharacterized protein.	Uncharacterized protein.	0.506
JCGZ_00713	JCGZ_12022	A0A067KRV6	A0A067KKF6	Uncharacterized protein.	Uncharacterized protein.	0.471
JCGZ_00713	JCGZ_16465	A0A067KRV6	A0A067JYN3	Uncharacterized protein.	Uncharacterized protein.	0.457
JCGZ_00713	JCGZ_17740	A0A067KRV6	A0A067JRQ9	Uncharacterized protein.	BURP domain-containing protein.	0.520
JCGZ_00713	JCGZ_25053	A0A067KRV6	A0A067JY59	Uncharacterized protein.	Uncharacterized protein.	0.469
JCGZ_00713	JCGZ_25196	A0A067KRV6	A0A067LER7	Uncharacterized protein.	F-box domain-containing protein.	0.426
JCGZ_00713	JCGZ_25332	A0A067KRV6	A0A067JL94	Uncharacterized protein.	Uncharacterized protein.	0.472
JCGZ_01059	JCGZ_08235	A0A067KT50	A0A067KYK2	Uncharacterized protein.	Uncharacterized protein.	0.420
JCGZ_01059	JCGZ_11667	A0A067KT50	A0A067K504	Uncharacterized protein.	Uncharacterized protein.	0.419
JCGZ_01059	JCGZ_16465	A0A067KT50	A0A067JYN3	Uncharacterized protein.	Uncharacterized protein.	0.521
JCGZ_01059	JCGZ_17740	A0A067KT50	A0A067JRQ9	Uncharacterized protein.	BURP domain-containing protein.	0.420
JCGZ_01059	JCGZ_27002	A0A067KT50	A0A067LD09	Uncharacterized protein.	Uncharacterized protein.	0.457
JCGZ_02173	JCGZ_05437	A0A067L6Q2	A0A067LH95	FRIGIDA-like protein; Belongs to the Frigida family.	Uncharacterized protein.	0.509
JCGZ_02173	JCGZ_11667	A0A067L6Q2	A0A067K504	FRIGIDA-like protein; Belongs to the Frigida family.	Uncharacterized protein.	0.487
JCGZ_02173	JCGZ_17740	A0A067L6Q2	A0A067JRQ9	FRIGIDA-like protein; Belongs to the Frigida family.	BURP domain-containing protein.	0.404
JCGZ_02173	JCGZ_25332	A0A067L6Q2	A0A067JL94	FRIGIDA-like protein; Belongs to the Frigida family.	Uncharacterized protein.	0.488
JCGZ_03319	JCGZ_00713	A0A067JFT4	A0A067KRV6	Uncharacterized protein.	Uncharacterized protein.	0.433