(79 nodes) Mixed, incl. Purine permease, plant, and Dirigent protein network (Jatropha curcas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_05896	Uncharacterized protein. (385 aa)
	JCGZ_21953	HMA domain-containing protein. (230 aa)
	JCGZ_21194	Uncharacterized protein. (356 aa)
	JCGZ_03029	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (194 aa)
	JCGZ_21284	Uncharacterized protein. (315 aa)
	JCGZ_23170	Uncharacterized protein. (275 aa)
	JCGZ_26339	Uncharacterized protein. (467 aa)
	JCGZ_25384	PMEI domain-containing protein. (215 aa)
	JCGZ_05809	Uncharacterized protein. (106 aa)
	JCGZ_25572	Uncharacterized protein. (100 aa)
	JCGZ_25633	Uncharacterized protein. (128 aa)
	JCGZ_21196	Uncharacterized protein. (410 aa)
	JCGZ_25153	Malectin domain-containing protein. (121 aa)
	JCGZ_21951	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (434 aa)
	JCGZ_20812	AAI domain-containing protein. (108 aa)
	JCGZ_22906	Uncharacterized protein. (226 aa)
	JCGZ_23108	NAB domain-containing protein. (212 aa)
	JCGZ_20988	Uncharacterized protein. (356 aa)
	JCGZ_23562	Uncharacterized protein. (292 aa)
	JCGZ_25631	Uncharacterized protein. (114 aa)
	JCGZ_14312	Uncharacterized protein. (108 aa)
	JCGZ_14308	F-box domain-containing protein. (405 aa)
	JCGZ_25861	Uncharacterized protein. (316 aa)
	JCGZ_13964	Uncharacterized protein. (115 aa)
	JCGZ_18338	Uncharacterized protein. (77 aa)
	JCGZ_18753	Uncharacterized protein. (105 aa)
	JCGZ_21053	Gnk2-homologous domain-containing protein. (185 aa)
	JCGZ_20775	Uncharacterized protein. (231 aa)
	JCGZ_16492	FAS1 domain-containing protein. (241 aa)
	JCGZ_21042	Uncharacterized protein. (160 aa)
	JCGZ_13819	EF-hand domain-containing protein. (70 aa)
	JCGZ_14681	Uncharacterized protein. (366 aa)
	JCGZ_07353	Uncharacterized protein. (94 aa)
	JCGZ_16238	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (180 aa)
	JCGZ_11000	Uncharacterized protein. (275 aa)
	JCGZ_12756	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (187 aa)
	JCGZ_11715	Uncharacterized protein. (163 aa)
	JCGZ_12491	Uncharacterized protein. (79 aa)
	JCGZ_12405	LEA_2 domain-containing protein. (319 aa)
	JCGZ_08946	Uncharacterized protein. (181 aa)
	JCGZ_12082	Uncharacterized protein. (414 aa)
	JCGZ_08167	Uncharacterized protein. (169 aa)
	JCGZ_08217	Uncharacterized protein. (99 aa)
	JCGZ_07046	Uncharacterized protein. (171 aa)
	JCGZ_04745	Uncharacterized protein. (286 aa)
	JCGZ_12758	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (188 aa)
	JCGZ_08419	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (156 aa)
	JCGZ_12757	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (108 aa)
	JCGZ_04576	Uncharacterized protein. (287 aa)
	JCGZ_04413	Uncharacterized protein. (373 aa)
	JCGZ_09002	Uncharacterized protein. (251 aa)
	JCGZ_02109	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (307 aa)
	JCGZ_08834	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (196 aa)
	JCGZ_08567	Phytocyanin domain-containing protein. (232 aa)
	JCGZ_24960	Uncharacterized protein. (472 aa)
	JCGZ_24911	Uncharacterized protein. (129 aa)
	JCGZ_24941	Uncharacterized protein. (355 aa)
	JCGZ_04188	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (213 aa)
	JCGZ_06270	Uncharacterized protein. (729 aa)
	JCGZ_16058	Uncharacterized protein. (472 aa)
	JCGZ_16059	Uncharacterized protein. (88 aa)
	JCGZ_05229	Uncharacterized protein. (100 aa)
	JCGZ_01915	Protein kinase domain-containing protein. (64 aa)
	JCGZ_02906	Uncharacterized protein. (283 aa)
	JCGZ_04577	Uncharacterized protein. (396 aa)
	JCGZ_04667	NmrA domain-containing protein. (88 aa)
	JCGZ_15850	GST N-terminal domain-containing protein. (105 aa)
	JCGZ_01027	FAS1 domain-containing protein. (404 aa)
	JCGZ_19203	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (194 aa)
	JCGZ_01346	Uncharacterized protein. (433 aa)
	JCGZ_16291	Uncharacterized protein. (479 aa)
	JCGZ_15846	Uncharacterized protein. (359 aa)
	JCGZ_06539	Uncharacterized protein. (118 aa)
	JCGZ_23007	Uncharacterized protein. (177 aa)
	JCGZ_19425	Uncharacterized protein. (110 aa)
	JCGZ_15125	Gnk2-homologous domain-containing protein. (222 aa)
	JCGZ_01514	Uncharacterized protein. (202 aa)
	JCGZ_11858	Uncharacterized protein. (382 aa)
	JCGZ_06538	Uncharacterized protein. (116 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01027	JCGZ_01514	A0A067L461	A0A067LKY8	FAS1 domain-containing protein.	Uncharacterized protein.	0.445
JCGZ_01027	JCGZ_04188	A0A067L461	A0A067KXZ9	FAS1 domain-containing protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.459
JCGZ_01027	JCGZ_06270	A0A067L461	A0A067KZH8	FAS1 domain-containing protein.	Uncharacterized protein.	0.460
JCGZ_01027	JCGZ_08567	A0A067L461	A0A067KXH4	FAS1 domain-containing protein.	Phytocyanin domain-containing protein.	0.424
JCGZ_01027	JCGZ_08834	A0A067L461	A0A067KVA3	FAS1 domain-containing protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.459
JCGZ_01027	JCGZ_09002	A0A067L461	A0A067KUP0	FAS1 domain-containing protein.	Uncharacterized protein.	0.417
JCGZ_01027	JCGZ_12082	A0A067L461	A0A067KKK4	FAS1 domain-containing protein.	Uncharacterized protein.	0.462
JCGZ_01027	JCGZ_12405	A0A067L461	A0A067KJD2	FAS1 domain-containing protein.	LEA_2 domain-containing protein.	0.493
JCGZ_01027	JCGZ_12757	A0A067L461	A0A067KRL3	FAS1 domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.411
JCGZ_01027	JCGZ_12758	A0A067L461	A0A067KQ98	FAS1 domain-containing protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.447
JCGZ_01027	JCGZ_14308	A0A067L461	A0A067JXC2	FAS1 domain-containing protein.	F-box domain-containing protein.	0.402
JCGZ_01027	JCGZ_16058	A0A067L461	A0A067KZM3	FAS1 domain-containing protein.	Uncharacterized protein.	0.444
JCGZ_01027	JCGZ_16291	A0A067L461	A0A067LB46	FAS1 domain-containing protein.	Uncharacterized protein.	0.434
JCGZ_01027	JCGZ_18338	A0A067L461	A0A067JZW1	FAS1 domain-containing protein.	Uncharacterized protein.	0.424
JCGZ_01027	JCGZ_20775	A0A067L461	A0A067K1F5	FAS1 domain-containing protein.	Uncharacterized protein.	0.537
JCGZ_01027	JCGZ_21053	A0A067L461	A0A067K184	FAS1 domain-containing protein.	Gnk2-homologous domain-containing protein.	0.403
JCGZ_01027	JCGZ_21194	A0A067L461	A0A067JDC2	FAS1 domain-containing protein.	Uncharacterized protein.	0.474
JCGZ_01027	JCGZ_21196	A0A067L461	A0A067JL63	FAS1 domain-containing protein.	Uncharacterized protein.	0.487
JCGZ_01027	JCGZ_21951	A0A067L461	A0A067JN84	FAS1 domain-containing protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.467
JCGZ_01027	JCGZ_22906	A0A067L461	A0A067JPH9	FAS1 domain-containing protein.	Uncharacterized protein.	0.496