110 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21527	Uncharacterized protein. (313 aa)
	JCGZ_21573	Uncharacterized protein. (668 aa)
	JCGZ_21818	GTD-binding domain-containing protein. (680 aa)
	JCGZ_21449	Uncharacterized protein. (306 aa)
	JCGZ_26088	C2H2-type domain-containing protein. (711 aa)
	JCGZ_26247	Uncharacterized protein. (208 aa)
	JCGZ_00370	Uncharacterized protein. (897 aa)
	JCGZ_21311	BHLH domain-containing protein. (480 aa)
	JCGZ_23516	TPX2 domain-containing protein. (345 aa)
	JCGZ_21900	AAI domain-containing protein; Belongs to the plant LTP family. (180 aa)
	JCGZ_25906	Uncharacterized protein. (455 aa)
	JCGZ_26090	Uncharacterized protein. (549 aa)
	JCGZ_01683	Uncharacterized protein. (726 aa)
	JCGZ_00366	OVATE domain-containing protein. (389 aa)
	JCGZ_19936	Uncharacterized protein. (1612 aa)
	JCGZ_21018	Uncharacterized protein. (180 aa)
	JCGZ_23358	Uncharacterized protein. (1042 aa)
	JCGZ_17541	GTD-binding domain-containing protein. (691 aa)
	JCGZ_00320	BHLH domain-containing protein. (962 aa)
	JCGZ_25388	Myb_DNA-bind_3 domain-containing protein. (325 aa)
	JCGZ_23572	Uncharacterized protein. (281 aa)
	JCGZ_19907	CaM_binding domain-containing protein. (614 aa)
	JCGZ_14307	Uncharacterized protein. (617 aa)
	JCGZ_14303	Uncharacterized protein. (202 aa)
	JCGZ_20129	Uncharacterized protein. (855 aa)
	JCGZ_25093	Uncharacterized protein. (410 aa)
	JCGZ_20336	Uncharacterized protein. (166 aa)
	JCGZ_20481	Zinc_ribbon_12 domain-containing protein. (883 aa)
	JCGZ_20506	Uncharacterized protein. (702 aa)
	JCGZ_20651	DUF4005 domain-containing protein. (509 aa)
	JCGZ_14179	LEA_2 domain-containing protein. (202 aa)
	JCGZ_14369	WRC domain-containing protein. (309 aa)
	JCGZ_14394	Uncharacterized protein. (942 aa)
	JCGZ_13784	Uncharacterized protein. (355 aa)
	JCGZ_17592	Uncharacterized protein. (965 aa)
	JCGZ_11333	Uncharacterized protein. (774 aa)
	JCGZ_11512	Uncharacterized protein. (1224 aa)
	JCGZ_11542	Uncharacterized protein. (565 aa)
	JCGZ_11707	Uncharacterized protein. (1858 aa)
	JCGZ_11598	DUF4005 domain-containing protein. (587 aa)
	JCGZ_11738	Uncharacterized protein. (1096 aa)
	JCGZ_15217	Protein kinase domain-containing protein. (762 aa)
	JCGZ_20266	Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (943 aa)
	JCGZ_12437	Uncharacterized protein. (272 aa)
	JCGZ_18859	SANT domain-containing protein. (887 aa)
	JCGZ_13231	Arf-GAP domain-containing protein. (717 aa)
	JCGZ_11679	Uncharacterized protein. (891 aa)
	JCGZ_11724	Uncharacterized protein. (683 aa)
	JCGZ_13920	RING-type domain-containing protein. (438 aa)
	JCGZ_14095	SBP-type domain-containing protein. (983 aa)
	JCGZ_14130	Uncharacterized protein. (296 aa)
	JCGZ_14285	Zinc_ribbon_12 domain-containing protein. (924 aa)
	JCGZ_18635	GUB_WAK_bind domain-containing protein. (304 aa)
	JCGZ_18280	BHLH domain-containing protein. (372 aa)
	JCGZ_12902	Uncharacterized protein. (294 aa)
	JCGZ_07079	Phytocyanin domain-containing protein. (178 aa)
	JCGZ_07514	FLZ-type domain-containing protein. (252 aa)
	JCGZ_12481	C2H2-type domain-containing protein. (192 aa)
	JCGZ_12486	FRIGIDA-like protein; Belongs to the Frigida family. (571 aa)
	JCGZ_12611	Uncharacterized protein. (453 aa)
	JCGZ_09216	Uncharacterized protein. (703 aa)
	JCGZ_14896	Uncharacterized protein. (324 aa)
	JCGZ_12335	Dof-type domain-containing protein. (326 aa)
	JCGZ_13284	ENT domain-containing protein. (411 aa)
	JCGZ_08222	Uncharacterized protein. (205 aa)
	JCGZ_09121	C2H2-type domain-containing protein. (299 aa)
	JCGZ_08163	Uncharacterized protein. (253 aa)
	JCGZ_06258	FLZ-type domain-containing protein. (377 aa)
	JCGZ_08407	PWWP domain-containing protein. (1612 aa)
	JCGZ_07116	Uncharacterized protein. (392 aa)
	JCGZ_09805	Uncharacterized protein. (714 aa)
	JCGZ_07291	Jas domain-containing protein. (509 aa)
	JCGZ_07225	FRIGIDA-like protein; Belongs to the Frigida family. (539 aa)
	JCGZ_07375	DUF4005 domain-containing protein. (432 aa)
	JCGZ_04865	Uncharacterized protein. (373 aa)
	JCGZ_03517	BAH domain-containing protein. (301 aa)
	JCGZ_24806	PWWP domain-containing protein. (770 aa)
	JCGZ_03158	Uncharacterized protein. (580 aa)
	JCGZ_15773	VQ domain-containing protein. (381 aa)
	JCGZ_15989	Uncharacterized protein. (613 aa)
	JCGZ_26815	GYF domain-containing protein. (1685 aa)
	BRC1	TCP transcription factor BRC1. (469 aa)
	JCGZ_04728	GTD-binding domain-containing protein. (860 aa)
	JCGZ_24942	Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (1001 aa)
	JCGZ_06394	VQ domain-containing protein. (225 aa)
	JCGZ_02982	HTH myb-type domain-containing protein. (697 aa)
	JCGZ_04455	J domain-containing protein. (1511 aa)
	JCGZ_15990	Uncharacterized protein. (608 aa)
	JCGZ_02948	Uncharacterized protein. (374 aa)
	JCGZ_03406	Uncharacterized protein. (329 aa)
	JCGZ_02569	Uncharacterized protein. (340 aa)
	JCGZ_05694	Uncharacterized protein. (203 aa)
	JCGZ_24594	MYB family protein. (557 aa)
	JCGZ_02187	Uncharacterized protein. (249 aa)
	JCGZ_02222	DUF4005 domain-containing protein. (453 aa)
	JCGZ_05700	Uncharacterized protein. (857 aa)
	JCGZ_16112	RING-type domain-containing protein. (713 aa)
	JCGZ_15891	Uncharacterized protein. (170 aa)
	JCGZ_16066	RING-type domain-containing protein. (391 aa)
	JCGZ_26767	Homeobox domain-containing protein. (678 aa)
	JCGZ_09577	PWWP domain-containing protein. (1039 aa)
	JCGZ_23625	Uncharacterized protein. (167 aa)
	JCGZ_23700	RING-CH-type domain-containing protein. (151 aa)
	JCGZ_24061	Uncharacterized protein. (712 aa)
	JCGZ_17325	OVATE domain-containing protein. (367 aa)
	JCGZ_08465	RING-type domain-containing protein. (472 aa)
	JCGZ_05487	POX domain-containing protein. (561 aa)
	JCGZ_01355	Uncharacterized protein. (424 aa)
	JCGZ_10170	Uncharacterized protein. (742 aa)
	JCGZ_06537	Uncharacterized protein. (374 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRC1	JCGZ_00366	A0A067L0H7	A0A067JTC6	TCP transcription factor BRC1.	OVATE domain-containing protein.	0.426
BRC1	JCGZ_01355	A0A067L0H7	A0A067LJL6	TCP transcription factor BRC1.	Uncharacterized protein.	0.455
BRC1	JCGZ_04728	A0A067L0H7	A0A067L0R9	TCP transcription factor BRC1.	GTD-binding domain-containing protein.	0.473
BRC1	JCGZ_05487	A0A067L0H7	A0A067LHE3	TCP transcription factor BRC1.	POX domain-containing protein.	0.459
BRC1	JCGZ_06258	A0A067L0H7	A0A067KM84	TCP transcription factor BRC1.	FLZ-type domain-containing protein.	0.478
BRC1	JCGZ_07225	A0A067L0H7	A0A067KPE0	TCP transcription factor BRC1.	FRIGIDA-like protein; Belongs to the Frigida family.	0.514
BRC1	JCGZ_07291	A0A067L0H7	A0A067KN91	TCP transcription factor BRC1.	Jas domain-containing protein.	0.460
BRC1	JCGZ_07375	A0A067L0H7	A0A067KPS4	TCP transcription factor BRC1.	DUF4005 domain-containing protein.	0.436
BRC1	JCGZ_09121	A0A067L0H7	A0A067KL22	TCP transcription factor BRC1.	C2H2-type domain-containing protein.	0.474
BRC1	JCGZ_11542	A0A067L0H7	A0A067K4L6	TCP transcription factor BRC1.	Uncharacterized protein.	0.485
BRC1	JCGZ_11679	A0A067L0H7	A0A067K8H7	TCP transcription factor BRC1.	Uncharacterized protein.	0.446
BRC1	JCGZ_12486	A0A067L0H7	A0A067KIC4	TCP transcription factor BRC1.	FRIGIDA-like protein; Belongs to the Frigida family.	0.501
BRC1	JCGZ_14307	A0A067L0H7	A0A067JX41	TCP transcription factor BRC1.	Uncharacterized protein.	0.447
BRC1	JCGZ_14896	A0A067L0H7	A0A067KIW3	TCP transcription factor BRC1.	Uncharacterized protein.	0.491
BRC1	JCGZ_15989	A0A067L0H7	A0A067KZH2	TCP transcription factor BRC1.	Uncharacterized protein.	0.407
BRC1	JCGZ_15990	A0A067L0H7	A0A067L2X2	TCP transcription factor BRC1.	Uncharacterized protein.	0.401
BRC1	JCGZ_16112	A0A067L0H7	A0A067LB63	TCP transcription factor BRC1.	RING-type domain-containing protein.	0.457
BRC1	JCGZ_19936	A0A067L0H7	A0A067JTP7	TCP transcription factor BRC1.	Uncharacterized protein.	0.439
BRC1	JCGZ_20481	A0A067L0H7	A0A067JZ99	TCP transcription factor BRC1.	Zinc_ribbon_12 domain-containing protein.	0.451
BRC1	JCGZ_21818	A0A067L0H7	A0A067JC20	TCP transcription factor BRC1.	GTD-binding domain-containing protein.	0.531