63 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21857	Uncharacterized protein. (801 aa)
	JCGZ_21744	Uncharacterized protein. (648 aa)
	JCGZ_26179	DUF4378 domain-containing protein. (584 aa)
	JCGZ_25769	Uncharacterized protein. (471 aa)
	JCGZ_23999	RING-type domain-containing protein. (729 aa)
	JCGZ_21300	Uncharacterized protein. (626 aa)
	JCGZ_20483	NAB domain-containing protein. (1307 aa)
	JCGZ_25334	Uncharacterized protein. (291 aa)
	JCGZ_03300	Zinc_ribbon_12 domain-containing protein. (888 aa)
	JCGZ_26006	Uncharacterized protein. (632 aa)
	JCGZ_17994	Uncharacterized protein. (390 aa)
	JCGZ_17511	Uncharacterized protein. (365 aa)
	JCGZ_25088	Uncharacterized protein. (924 aa)
	JCGZ_16480	Uncharacterized protein. (313 aa)
	JCGZ_19259	Uncharacterized protein. (676 aa)
	JCGZ_20555	Homeobox domain-containing protein. (690 aa)
	JCGZ_18432	Jas domain-containing protein. (587 aa)
	JCGZ_16487	RING-type domain-containing protein. (536 aa)
	JCGZ_17712	BHLH domain-containing protein. (749 aa)
	JCGZ_19894	Uncharacterized protein. (1035 aa)
	JCGZ_19959	Uncharacterized protein. (1013 aa)
	JCGZ_14211	Uncharacterized protein. (361 aa)
	JCGZ_11799	BHLH domain-containing protein. (563 aa)
	JCGZ_12033	Uncharacterized protein. (603 aa)
	JCGZ_12319	Dof-type domain-containing protein. (214 aa)
	JCGZ_12860	Uncharacterized protein. (639 aa)
	JCGZ_16463	Uncharacterized protein. (727 aa)
	JCGZ_13218	Tify domain-containing protein. (445 aa)
	JCGZ_07258	VARLMGL domain-containing protein. (852 aa)
	JCGZ_12095	Uncharacterized protein. (681 aa)
	JCGZ_07618	Uncharacterized protein. (450 aa)
	JCGZ_07807	FLZ-type domain-containing protein. (407 aa)
	JCGZ_17051	Uncharacterized protein. (430 aa)
	JCGZ_09014	Uncharacterized protein. (813 aa)
	JCGZ_11555	Uncharacterized protein. (363 aa)
	JCGZ_08785	OVATE domain-containing protein. (223 aa)
	JCGZ_12230	Uncharacterized protein. (442 aa)
	JCGZ_09826	RING-type domain-containing protein. (552 aa)
	JCGZ_08244	DUF4005 domain-containing protein. (803 aa)
	JCGZ_09308	PB1 domain-containing protein. (706 aa)
	JCGZ_02164	Uncharacterized protein. (216 aa)
	JCGZ_02179	OVATE domain-containing protein. (262 aa)
	JCGZ_02145	Uncharacterized protein. (239 aa)
	JCGZ_24866	Uncharacterized protein. (385 aa)
	JCGZ_02136	Uncharacterized protein. (336 aa)
	JCGZ_02216	NAB domain-containing protein. (1811 aa)
	JCGZ_24857	Uncharacterized protein. (526 aa)
	JCGZ_04299	Uncharacterized protein. (215 aa)
	JCGZ_22738	Uncharacterized protein. (1290 aa)
	JCGZ_01022	Uncharacterized protein. (1563 aa)
	JCGZ_05439	Uncharacterized protein. (258 aa)
	JCGZ_02283	TPX2 domain-containing protein. (409 aa)
	JCGZ_02313	RING-type domain-containing protein. (368 aa)
	JCGZ_17238	Uncharacterized protein. (386 aa)
	JCGZ_15671	Uncharacterized protein. (1078 aa)
	JCGZ_15691	Uncharacterized protein. (540 aa)
	JCGZ_26807	Uncharacterized protein. (364 aa)
	JCGZ_23902	Uncharacterized protein. (510 aa)
	JCGZ_10193	TPX2 domain-containing protein. (549 aa)
	JCGZ_16781	Uncharacterized protein. (1204 aa)
	JCGZ_24072	Uncharacterized protein. (358 aa)
	JCGZ_05706	Uncharacterized protein. (273 aa)
	JCGZ_08552	Uncharacterized protein. (664 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01022	JCGZ_09014	A0A067L456	A0A067KH60	Uncharacterized protein.	Uncharacterized protein.	0.403
JCGZ_01022	JCGZ_12230	A0A067L456	A0A067KIY0	Uncharacterized protein.	Uncharacterized protein.	0.430
JCGZ_01022	JCGZ_15691	A0A067L456	A0A067LB22	Uncharacterized protein.	Uncharacterized protein.	0.419
JCGZ_01022	JCGZ_16463	A0A067L456	A0A067KB73	Uncharacterized protein.	Uncharacterized protein.	0.477
JCGZ_01022	JCGZ_17238	A0A067L456	A0A067LAY0	Uncharacterized protein.	Uncharacterized protein.	0.412
JCGZ_02136	JCGZ_02216	A0A067KYU3	A0A067KZ63	Uncharacterized protein.	NAB domain-containing protein.	0.434
JCGZ_02136	JCGZ_03300	A0A067KYU3	A0A067JQ36	Uncharacterized protein.	Zinc_ribbon_12 domain-containing protein.	0.421
JCGZ_02136	JCGZ_05706	A0A067KYU3	A0A067LJ30	Uncharacterized protein.	Uncharacterized protein.	0.434
JCGZ_02136	JCGZ_09308	A0A067KYU3	A0A067KRV4	Uncharacterized protein.	PB1 domain-containing protein.	0.428
JCGZ_02136	JCGZ_12230	A0A067KYU3	A0A067KIY0	Uncharacterized protein.	Uncharacterized protein.	0.510
JCGZ_02136	JCGZ_12319	A0A067KYU3	A0A067KA50	Uncharacterized protein.	Dof-type domain-containing protein.	0.461
JCGZ_02136	JCGZ_12860	A0A067KYU3	A0A067KAR6	Uncharacterized protein.	Uncharacterized protein.	0.424
JCGZ_02136	JCGZ_16463	A0A067KYU3	A0A067KB73	Uncharacterized protein.	Uncharacterized protein.	0.471
JCGZ_02136	JCGZ_16480	A0A067KYU3	A0A067JYP7	Uncharacterized protein.	Uncharacterized protein.	0.525
JCGZ_02136	JCGZ_17511	A0A067KYU3	A0A067JU80	Uncharacterized protein.	Uncharacterized protein.	0.491
JCGZ_02136	JCGZ_17712	A0A067KYU3	A0A067K423	Uncharacterized protein.	BHLH domain-containing protein.	0.446
JCGZ_02136	JCGZ_19259	A0A067KYU3	A0A067JZZ3	Uncharacterized protein.	Uncharacterized protein.	0.445
JCGZ_02136	JCGZ_24072	A0A067KYU3	A0A067LHM4	Uncharacterized protein.	Uncharacterized protein.	0.505
JCGZ_02136	JCGZ_25088	A0A067KYU3	A0A067JY97	Uncharacterized protein.	Uncharacterized protein.	0.493
JCGZ_02145	JCGZ_02216	A0A067KVH6	A0A067KZ63	Uncharacterized protein.	NAB domain-containing protein.	0.416