18 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21300	Uncharacterized protein. (626 aa)
	JCGZ_25334	Uncharacterized protein. (291 aa)
	JCGZ_03300	Zinc_ribbon_12 domain-containing protein. (888 aa)
	JCGZ_17511	Uncharacterized protein. (365 aa)
	JCGZ_25088	Uncharacterized protein. (924 aa)
	JCGZ_19259	Uncharacterized protein. (676 aa)
	JCGZ_18432	Jas domain-containing protein. (587 aa)
	JCGZ_12033	Uncharacterized protein. (603 aa)
	JCGZ_11555	Uncharacterized protein. (363 aa)
	JCGZ_12230	Uncharacterized protein. (442 aa)
	JCGZ_08244	DUF4005 domain-containing protein. (803 aa)
	JCGZ_09308	PB1 domain-containing protein. (706 aa)
	JCGZ_02145	Uncharacterized protein. (239 aa)
	JCGZ_02216	NAB domain-containing protein. (1811 aa)
	JCGZ_05439	Uncharacterized protein. (258 aa)
	JCGZ_15671	Uncharacterized protein. (1078 aa)
	JCGZ_05706	Uncharacterized protein. (273 aa)
	JCGZ_08552	Uncharacterized protein. (664 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02145	JCGZ_02216	A0A067KVH6	A0A067KZ63	Uncharacterized protein.	NAB domain-containing protein.	0.416
JCGZ_02145	JCGZ_05439	A0A067KVH6	A0A067L6B7	Uncharacterized protein.	Uncharacterized protein.	0.491
JCGZ_02145	JCGZ_05706	A0A067KVH6	A0A067LJ30	Uncharacterized protein.	Uncharacterized protein.	0.439
JCGZ_02145	JCGZ_08244	A0A067KVH6	A0A067KPK0	Uncharacterized protein.	DUF4005 domain-containing protein.	0.630
JCGZ_02145	JCGZ_09308	A0A067KVH6	A0A067KRV4	Uncharacterized protein.	PB1 domain-containing protein.	0.485
JCGZ_02145	JCGZ_11555	A0A067KVH6	A0A067KH81	Uncharacterized protein.	Uncharacterized protein.	0.405
JCGZ_02145	JCGZ_12033	A0A067KVH6	A0A067K960	Uncharacterized protein.	Uncharacterized protein.	0.412
JCGZ_02145	JCGZ_15671	A0A067KVH6	A0A067LB08	Uncharacterized protein.	Uncharacterized protein.	0.430
JCGZ_02145	JCGZ_17511	A0A067KVH6	A0A067JU80	Uncharacterized protein.	Uncharacterized protein.	0.417
JCGZ_02145	JCGZ_18432	A0A067KVH6	A0A067K150	Uncharacterized protein.	Jas domain-containing protein.	0.488
JCGZ_02145	JCGZ_21300	A0A067KVH6	A0A067JMU4	Uncharacterized protein.	Uncharacterized protein.	0.424
JCGZ_02145	JCGZ_25088	A0A067KVH6	A0A067JY97	Uncharacterized protein.	Uncharacterized protein.	0.447
JCGZ_02145	JCGZ_25334	A0A067KVH6	A0A067JPM1	Uncharacterized protein.	Uncharacterized protein.	0.414
JCGZ_02216	JCGZ_02145	A0A067KZ63	A0A067KVH6	NAB domain-containing protein.	Uncharacterized protein.	0.416
JCGZ_02216	JCGZ_05439	A0A067KZ63	A0A067L6B7	NAB domain-containing protein.	Uncharacterized protein.	0.426
JCGZ_02216	JCGZ_05706	A0A067KZ63	A0A067LJ30	NAB domain-containing protein.	Uncharacterized protein.	0.520
JCGZ_02216	JCGZ_08552	A0A067KZ63	A0A067LNY0	NAB domain-containing protein.	Uncharacterized protein.	0.515
JCGZ_02216	JCGZ_09308	A0A067KZ63	A0A067KRV4	NAB domain-containing protein.	PB1 domain-containing protein.	0.509
JCGZ_02216	JCGZ_11555	A0A067KZ63	A0A067KH81	NAB domain-containing protein.	Uncharacterized protein.	0.423
JCGZ_02216	JCGZ_12033	A0A067KZ63	A0A067K960	NAB domain-containing protein.	Uncharacterized protein.	0.464