25 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21442	Uncharacterized protein. (960 aa)
	JCGZ_03289	F-box domain-containing protein. (365 aa)
	JCGZ_25657	Uncharacterized protein. (350 aa)
	JCGZ_25442	Uncharacterized protein. (545 aa)
	JCGZ_20558	BTB domain-containing protein. (665 aa)
	JCGZ_23933	Uncharacterized protein; Belongs to the terpene synthase family. (402 aa)
	JCGZ_26452	F-box domain-containing protein. (402 aa)
	JCGZ_23929	Uncharacterized protein. (588 aa)
	JCGZ_17973	F-box domain-containing protein. (463 aa)
	JCGZ_09900	Uncharacterized protein. (720 aa)
	JCGZ_06358	Uncharacterized protein. (525 aa)
	JCGZ_04715	Bet_v_1 domain-containing protein. (158 aa)
	JCGZ_06064	F-box domain-containing protein. (393 aa)
	JCGZ_11916	Uncharacterized protein. (421 aa)
	JCGZ_06214	Uncharacterized protein. (729 aa)
	JCGZ_04024	BTB domain-containing protein. (446 aa)
	JCGZ_05049	Phytocyanin domain-containing protein. (106 aa)
	JCGZ_04408	Uncharacterized protein. (444 aa)
	JCGZ_00766	Uncharacterized protein. (316 aa)
	JCGZ_02358	Uncharacterized protein. (931 aa)
	JCGZ_12939	Uncharacterized protein. (533 aa)
	JCGZ_10202	Uncharacterized protein. (580 aa)
	JCGZ_17377	Uncharacterized protein. (493 aa)
	JCGZ_11833	Uncharacterized protein. (444 aa)
	JCGZ_11832	Uncharacterized protein. (808 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00766	JCGZ_02358	A0A067L4I9	A0A067L779	Uncharacterized protein.	Uncharacterized protein.	0.474
JCGZ_00766	JCGZ_03289	A0A067L4I9	A0A067JFQ1	Uncharacterized protein.	F-box domain-containing protein.	0.473
JCGZ_00766	JCGZ_04408	A0A067L4I9	A0A067KU18	Uncharacterized protein.	Uncharacterized protein.	0.488
JCGZ_00766	JCGZ_04715	A0A067L4I9	A0A067KPJ7	Uncharacterized protein.	Bet_v_1 domain-containing protein.	0.422
JCGZ_00766	JCGZ_06064	A0A067L4I9	A0A067KPQ9	Uncharacterized protein.	F-box domain-containing protein.	0.451
JCGZ_00766	JCGZ_06214	A0A067L4I9	A0A067KQ97	Uncharacterized protein.	Uncharacterized protein.	0.440
JCGZ_00766	JCGZ_06358	A0A067L4I9	A0A067KNP7	Uncharacterized protein.	Uncharacterized protein.	0.407
JCGZ_00766	JCGZ_09900	A0A067L4I9	A0A067KLP5	Uncharacterized protein.	Uncharacterized protein.	0.428
JCGZ_00766	JCGZ_11832	A0A067L4I9	A0A067LN86	Uncharacterized protein.	Uncharacterized protein.	0.495
JCGZ_00766	JCGZ_11833	A0A067L4I9	A0A067LMA4	Uncharacterized protein.	Uncharacterized protein.	0.463
JCGZ_00766	JCGZ_11916	A0A067L4I9	A0A067KQ67	Uncharacterized protein.	Uncharacterized protein.	0.497
JCGZ_00766	JCGZ_12939	A0A067L4I9	A0A067LD93	Uncharacterized protein.	Uncharacterized protein.	0.440
JCGZ_00766	JCGZ_17377	A0A067L4I9	A0A067LLX6	Uncharacterized protein.	Uncharacterized protein.	0.509
JCGZ_00766	JCGZ_17973	A0A067L4I9	A0A067K3J1	Uncharacterized protein.	F-box domain-containing protein.	0.447
JCGZ_00766	JCGZ_21442	A0A067L4I9	A0A067JAY3	Uncharacterized protein.	Uncharacterized protein.	0.502
JCGZ_00766	JCGZ_23929	A0A067L4I9	A0A067K1V2	Uncharacterized protein.	Uncharacterized protein.	0.455
JCGZ_00766	JCGZ_23933	A0A067L4I9	A0A067JSJ6	Uncharacterized protein.	Uncharacterized protein; Belongs to the terpene synthase family.	0.415
JCGZ_00766	JCGZ_25442	A0A067L4I9	A0A067JL68	Uncharacterized protein.	Uncharacterized protein.	0.424
JCGZ_00766	JCGZ_25657	A0A067L4I9	A0A067JK50	Uncharacterized protein.	Uncharacterized protein.	0.486
JCGZ_00766	JCGZ_26452	A0A067L4I9	A0A067JYS1	Uncharacterized protein.	F-box domain-containing protein.	0.405