24 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_25998	Uncharacterized protein. (295 aa)
	JCGZ_26128	F-box domain-containing protein. (305 aa)
	JCGZ_25788	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (163 aa)
	JCGZ_21275	Uncharacterized protein. (212 aa)
	JCGZ_21800	LOB domain-containing protein. (219 aa)
	JCGZ_22707	Uncharacterized protein. (191 aa)
	JCGZ_14448	C2 domain-containing protein. (181 aa)
	JCGZ_14567	Uncharacterized protein. (293 aa)
	JCGZ_22475	Uncharacterized protein. (463 aa)
	JCGZ_13825	F-box domain-containing protein. (440 aa)
	JCGZ_08127	Uncharacterized protein. (329 aa)
	JCGZ_04679	HMA domain-containing protein. (419 aa)
	JCGZ_07280	Uncharacterized protein. (195 aa)
	JCGZ_08264	HMA domain-containing protein. (124 aa)
	JCGZ_04258	Uncharacterized protein. (256 aa)
	JCGZ_04046	Uncharacterized protein. (262 aa)
	JCGZ_23652	Uncharacterized protein. (185 aa)
	JCGZ_16125	RING-type domain-containing protein. (339 aa)
	JCGZ_16758	Uncharacterized protein. (332 aa)
	JCGZ_02625	Uncharacterized protein. (428 aa)
	JCGZ_10217	DUF4220 domain-containing protein. (720 aa)
	JCGZ_10282	Uncharacterized protein. (155 aa)
	JCGZ_20890	DUF4220 domain-containing protein. (715 aa)
	JCGZ_10140	Uncharacterized protein. (235 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02625	JCGZ_04258	A0A067L526	A0A067KTP7	Uncharacterized protein.	Uncharacterized protein.	0.478
JCGZ_02625	JCGZ_14567	A0A067L526	A0A067JXW4	Uncharacterized protein.	Uncharacterized protein.	0.423
JCGZ_02625	JCGZ_21800	A0A067L526	A0A067JP72	Uncharacterized protein.	LOB domain-containing protein.	0.509
JCGZ_02625	JCGZ_23652	A0A067L526	A0A067L2V1	Uncharacterized protein.	Uncharacterized protein.	0.462
JCGZ_02625	JCGZ_25998	A0A067L526	A0A067JEB8	Uncharacterized protein.	Uncharacterized protein.	0.458
JCGZ_04046	JCGZ_04258	A0A067KUR5	A0A067KTP7	Uncharacterized protein.	Uncharacterized protein.	0.413
JCGZ_04046	JCGZ_04679	A0A067KUR5	A0A067KP85	Uncharacterized protein.	HMA domain-containing protein.	0.458
JCGZ_04046	JCGZ_07280	A0A067KUR5	A0A067KPK9	Uncharacterized protein.	Uncharacterized protein.	0.490
JCGZ_04046	JCGZ_08127	A0A067KUR5	A0A067KKS2	Uncharacterized protein.	Uncharacterized protein.	0.444
JCGZ_04046	JCGZ_08264	A0A067KUR5	A0A067KRD5	Uncharacterized protein.	HMA domain-containing protein.	0.415
JCGZ_04046	JCGZ_13825	A0A067KUR5	A0A067KB67	Uncharacterized protein.	F-box domain-containing protein.	0.442
JCGZ_04046	JCGZ_16758	A0A067KUR5	A0A067L4S2	Uncharacterized protein.	Uncharacterized protein.	0.429
JCGZ_04046	JCGZ_20890	A0A067KUR5	A0A067LH29	Uncharacterized protein.	DUF4220 domain-containing protein.	0.405
JCGZ_04046	JCGZ_21275	A0A067KUR5	A0A067JMS3	Uncharacterized protein.	Uncharacterized protein.	0.536
JCGZ_04046	JCGZ_22475	A0A067KUR5	A0A067K386	Uncharacterized protein.	Uncharacterized protein.	0.425
JCGZ_04046	JCGZ_22707	A0A067KUR5	A0A067JQ15	Uncharacterized protein.	Uncharacterized protein.	0.455
JCGZ_04046	JCGZ_23652	A0A067KUR5	A0A067L2V1	Uncharacterized protein.	Uncharacterized protein.	0.415
JCGZ_04046	JCGZ_26128	A0A067KUR5	A0A067JEP8	Uncharacterized protein.	F-box domain-containing protein.	0.418
JCGZ_04258	JCGZ_02625	A0A067KTP7	A0A067L526	Uncharacterized protein.	Uncharacterized protein.	0.478
JCGZ_04258	JCGZ_04046	A0A067KTP7	A0A067KUR5	Uncharacterized protein.	Uncharacterized protein.	0.413