13 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21275	Uncharacterized protein. (212 aa)
	JCGZ_22707	Uncharacterized protein. (191 aa)
	JCGZ_22475	Uncharacterized protein. (463 aa)
	JCGZ_13825	F-box domain-containing protein. (440 aa)
	JCGZ_08127	Uncharacterized protein. (329 aa)
	JCGZ_04679	HMA domain-containing protein. (419 aa)
	JCGZ_07280	Uncharacterized protein. (195 aa)
	JCGZ_04046	Uncharacterized protein. (262 aa)
	JCGZ_16758	Uncharacterized protein. (332 aa)
	JCGZ_10217	DUF4220 domain-containing protein. (720 aa)
	JCGZ_10282	Uncharacterized protein. (155 aa)
	JCGZ_20890	DUF4220 domain-containing protein. (715 aa)
	JCGZ_10140	Uncharacterized protein. (235 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_04046	JCGZ_04679	A0A067KUR5	A0A067KP85	Uncharacterized protein.	HMA domain-containing protein.	0.458
JCGZ_04046	JCGZ_07280	A0A067KUR5	A0A067KPK9	Uncharacterized protein.	Uncharacterized protein.	0.490
JCGZ_04046	JCGZ_08127	A0A067KUR5	A0A067KKS2	Uncharacterized protein.	Uncharacterized protein.	0.444
JCGZ_04046	JCGZ_13825	A0A067KUR5	A0A067KB67	Uncharacterized protein.	F-box domain-containing protein.	0.442
JCGZ_04046	JCGZ_16758	A0A067KUR5	A0A067L4S2	Uncharacterized protein.	Uncharacterized protein.	0.429
JCGZ_04046	JCGZ_20890	A0A067KUR5	A0A067LH29	Uncharacterized protein.	DUF4220 domain-containing protein.	0.405
JCGZ_04046	JCGZ_21275	A0A067KUR5	A0A067JMS3	Uncharacterized protein.	Uncharacterized protein.	0.536
JCGZ_04046	JCGZ_22475	A0A067KUR5	A0A067K386	Uncharacterized protein.	Uncharacterized protein.	0.425
JCGZ_04046	JCGZ_22707	A0A067KUR5	A0A067JQ15	Uncharacterized protein.	Uncharacterized protein.	0.455
JCGZ_04679	JCGZ_04046	A0A067KP85	A0A067KUR5	HMA domain-containing protein.	Uncharacterized protein.	0.458
JCGZ_04679	JCGZ_07280	A0A067KP85	A0A067KPK9	HMA domain-containing protein.	Uncharacterized protein.	0.426
JCGZ_04679	JCGZ_21275	A0A067KP85	A0A067JMS3	HMA domain-containing protein.	Uncharacterized protein.	0.433
JCGZ_04679	JCGZ_22475	A0A067KP85	A0A067K386	HMA domain-containing protein.	Uncharacterized protein.	0.456
JCGZ_07280	JCGZ_04046	A0A067KPK9	A0A067KUR5	Uncharacterized protein.	Uncharacterized protein.	0.490
JCGZ_07280	JCGZ_04679	A0A067KPK9	A0A067KP85	Uncharacterized protein.	HMA domain-containing protein.	0.426
JCGZ_07280	JCGZ_10140	A0A067KPK9	A0A067LN94	Uncharacterized protein.	Uncharacterized protein.	0.488
JCGZ_07280	JCGZ_16758	A0A067KPK9	A0A067L4S2	Uncharacterized protein.	Uncharacterized protein.	0.517
JCGZ_07280	JCGZ_21275	A0A067KPK9	A0A067JMS3	Uncharacterized protein.	Uncharacterized protein.	0.421
JCGZ_07280	JCGZ_22707	A0A067KPK9	A0A067JQ15	Uncharacterized protein.	Uncharacterized protein.	0.490
JCGZ_08127	JCGZ_04046	A0A067KKS2	A0A067KUR5	Uncharacterized protein.	Uncharacterized protein.	0.444