97 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_06853	C2 domain-containing protein. (188 aa)
	JCGZ_21792	Uncharacterized protein. (445 aa)
	JCGZ_21902	AAI domain-containing protein; Belongs to the plant LTP family. (166 aa)
	JCGZ_21779	Uncharacterized protein. (179 aa)
	JCGZ_21899	AAI domain-containing protein; Belongs to the plant LTP family. (204 aa)
	JCGZ_26104	Uncharacterized protein. (184 aa)
	JCGZ_23270	F-box domain-containing protein. (285 aa)
	JCGZ_26389	Uncharacterized protein. (551 aa)
	JCGZ_05909	Uncharacterized protein. (240 aa)
	JCGZ_05258	AAI domain-containing protein; Belongs to the plant LTP family. (196 aa)
	JCGZ_25800	C2H2-type domain-containing protein. (514 aa)
	JCGZ_21355	F-box domain-containing protein. (181 aa)
	JCGZ_20773	PMEI domain-containing protein. (204 aa)
	JCGZ_03253	Uncharacterized protein. (126 aa)
	JCGZ_24267	Uncharacterized protein. (348 aa)
	JCGZ_20779	Uncharacterized protein. (164 aa)
	JCGZ_19611	Uncharacterized protein. (102 aa)
	JCGZ_19617	Uncharacterized protein. (94 aa)
	JCGZ_00127	Uncharacterized protein. (120 aa)
	JCGZ_18957	Uncharacterized protein. (268 aa)
	JCGZ_14362	Malectin_like domain-containing protein. (473 aa)
	JCGZ_19613	Uncharacterized protein. (100 aa)
	JCGZ_14553	Uncharacterized protein. (168 aa)
	JCGZ_16611	Uncharacterized protein. (429 aa)
	JCGZ_14324	Uncharacterized protein. (478 aa)
	JCGZ_14584	Uncharacterized protein. (125 aa)
	JCGZ_14629	Uncharacterized protein. (810 aa)
	JCGZ_18359	Uncharacterized protein. (299 aa)
	JCGZ_17807	Uncharacterized protein. (623 aa)
	JCGZ_18487	F-box domain-containing protein. (160 aa)
	JCGZ_11608	PMEI domain-containing protein. (241 aa)
	JCGZ_19620	Uncharacterized protein. (96 aa)
	JCGZ_19635	Uncharacterized protein. (318 aa)
	JCGZ_16236	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (185 aa)
	JCGZ_19629	Uncharacterized protein. (139 aa)
	JCGZ_14864	Uncharacterized protein. (330 aa)
	JCGZ_13664	Uncharacterized protein. (348 aa)
	JCGZ_14280	SANT domain-containing protein. (59 aa)
	JCGZ_13528	Bulb-type lectin domain-containing protein. (374 aa)
	JCGZ_13618	BHLH domain-containing protein. (302 aa)
	JCGZ_14655	Myb-like domain-containing protein. (357 aa)
	JCGZ_07362	Senescence domain-containing protein. (383 aa)
	JCGZ_07498	Uncharacterized protein. (151 aa)
	JCGZ_07768	Uncharacterized protein. (350 aa)
	JCGZ_18746	Uncharacterized protein. (144 aa)
	JCGZ_10892	Uncharacterized protein. (168 aa)
	JCGZ_11296	DYW_deaminase domain-containing protein. (704 aa)
	JCGZ_08751	RING-type E3 ubiquitin transferase. (393 aa)
	JCGZ_09321	Uncharacterized protein. (201 aa)
	JCGZ_12395	Uncharacterized protein. (400 aa)
	JCGZ_08651	Methyltransf_11 domain-containing protein. (234 aa)
	JCGZ_14743	Bulb-type lectin domain-containing protein. (265 aa)
	JCGZ_10520	FAR1 domain-containing protein. (249 aa)
	JCGZ_07110	Uncharacterized protein. (384 aa)
	JCGZ_07646	Uncharacterized protein. (131 aa)
	JCGZ_04734	PMEI domain-containing protein. (206 aa)
	JCGZ_08239	Uncharacterized protein. (420 aa)
	JCGZ_08249	Uncharacterized protein. (337 aa)
	JCGZ_04824	Uncharacterized protein. (278 aa)
	JCGZ_04900	Uncharacterized protein. (206 aa)
	JCGZ_11100	Uncharacterized protein. (100 aa)
	JCGZ_11059	Uncharacterized protein. (201 aa)
	JCGZ_00689	Uncharacterized protein. (340 aa)
	JCGZ_10689	Metallophos domain-containing protein. (398 aa)
	JCGZ_08829	Uncharacterized protein. (347 aa)
	JCGZ_00690	Uncharacterized protein. (338 aa)
	JCGZ_09840	TCP domain-containing protein. (428 aa)
	JCGZ_02294	Uncharacterized protein. (593 aa)
	JCGZ_24681	Uncharacterized protein. (158 aa)
	JCGZ_08236	Uncharacterized protein. (150 aa)
	JCGZ_08175	Uncharacterized protein. (382 aa)
	JCGZ_02186	Uncharacterized protein. (185 aa)
	JCGZ_15839	BHLH domain-containing protein. (338 aa)
	JCGZ_26775	RING-type domain-containing protein. (438 aa)
	JCGZ_24662	Uncharacterized protein. (287 aa)
	JCGZ_01854	Uncharacterized protein. (199 aa)
	JCGZ_15720	Uncharacterized protein. (346 aa)
	JCGZ_00170	TCP domain-containing protein. (333 aa)
	JCGZ_02198	Non-specific lipid transfer protein A; Belongs to the plant LTP family. (170 aa)
	JCGZ_24653	Uncharacterized protein. (120 aa)
	GRAS13	GRAS13 protein; Belongs to the GRAS family. (453 aa)
	JCGZ_15072	Rhodanese domain-containing protein. (333 aa)
	JCGZ_17079	LEA_2 domain-containing protein. (210 aa)
	JCGZ_16096	F-box domain-containing protein. (532 aa)
	JCGZ_13473	DUF641 domain-containing protein. (470 aa)
	JCGZ_08549	Uncharacterized protein. (181 aa)
	GRAS16	GRAS16 protein; Belongs to the GRAS family. (586 aa)
	JCGZ_27054	Uncharacterized protein. (565 aa)
	JCGZ_20855	Uncharacterized protein. (221 aa)
	JCGZ_00044	LEA_2 domain-containing protein. (304 aa)
	JCGZ_05536	Uncharacterized protein. (339 aa)
	JCGZ_15135	RING-type E3 ubiquitin transferase. (457 aa)
	JCGZ_08542	Uncharacterized protein. (453 aa)
	JCGZ_08546	Uncharacterized protein. (355 aa)
	JHL18I08.14	JHL18I08.14 protein. (315 aa)
	JCGZ_08042	NAC transcription factor 007. (368 aa)
	JCGZ_10487	NAC transcription factor 047. (659 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GRAS13	JCGZ_02198	A0A067L9I1	A0A067L6V1	GRAS13 protein; Belongs to the GRAS family.	Non-specific lipid transfer protein A; Belongs to the plant LTP family.	0.415
GRAS13	JCGZ_03253	A0A067L9I1	A0A067JPE4	GRAS13 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.407
GRAS13	JCGZ_07646	A0A067L9I1	A0A067KP56	GRAS13 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.493
GRAS13	JCGZ_13618	A0A067L9I1	A0A067KAC6	GRAS13 protein; Belongs to the GRAS family.	BHLH domain-containing protein.	0.435
GRAS13	JCGZ_14324	A0A067L9I1	A0A067K0F4	GRAS13 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.486
GRAS13	JCGZ_21899	A0A067L9I1	A0A067JF68	GRAS13 protein; Belongs to the GRAS family.	AAI domain-containing protein; Belongs to the plant LTP family.	0.470
GRAS13	JCGZ_21902	A0A067L9I1	A0A067JC52	GRAS13 protein; Belongs to the GRAS family.	AAI domain-containing protein; Belongs to the plant LTP family.	0.445
GRAS16	JCGZ_04824	A0A067LEX6	A0A067KPQ0	GRAS16 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.607
GRAS16	JCGZ_08249	A0A067LEX6	A0A067KPK2	GRAS16 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.478
GRAS16	JCGZ_19617	A0A067LEX6	A0A067JUN3	GRAS16 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.430
GRAS16	JCGZ_19620	A0A067LEX6	A0A067K5T5	GRAS16 protein; Belongs to the GRAS family.	Uncharacterized protein.	0.416
JCGZ_00044	JCGZ_00127	A0A067LID6	A0A067JUY8	LEA_2 domain-containing protein.	Uncharacterized protein.	0.463
JCGZ_00044	JCGZ_04734	A0A067LID6	A0A067KPE8	LEA_2 domain-containing protein.	PMEI domain-containing protein.	0.415
JCGZ_00044	JCGZ_04824	A0A067LID6	A0A067KPQ0	LEA_2 domain-containing protein.	Uncharacterized protein.	0.409
JCGZ_00044	JCGZ_08236	A0A067LID6	A0A067KXE4	LEA_2 domain-containing protein.	Uncharacterized protein.	0.471
JCGZ_00044	JCGZ_08829	A0A067LID6	A0A067KV96	LEA_2 domain-containing protein.	Uncharacterized protein.	0.422
JCGZ_00044	JCGZ_09321	A0A067LID6	A0A067KJ29	LEA_2 domain-containing protein.	Uncharacterized protein.	0.414
JCGZ_00044	JCGZ_11100	A0A067LID6	A0A067KQH3	LEA_2 domain-containing protein.	Uncharacterized protein.	0.411
JCGZ_00044	JCGZ_14584	A0A067LID6	A0A067K1B1	LEA_2 domain-containing protein.	Uncharacterized protein.	0.445
JCGZ_00044	JCGZ_18487	A0A067LID6	A0A067K4E4	LEA_2 domain-containing protein.	F-box domain-containing protein.	0.453