12 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21199	Uncharacterized protein. (278 aa)
	JCGZ_02494	Uncharacterized protein. (74 aa)
	JCGZ_00632	Uncharacterized protein; Belongs to the NPH3 family. (606 aa)
	JCGZ_17927	Uncharacterized protein. (451 aa)
	JCGZ_12003	F-box domain-containing protein. (472 aa)
	JCGZ_14140	Uncharacterized protein. (134 aa)
	JCGZ_07061	Uncharacterized protein. (495 aa)
	JCGZ_05355	F-box domain-containing protein. (473 aa)
	JCGZ_02379	Uncharacterized protein. (714 aa)
	JCGZ_06291	Uncharacterized protein. (177 aa)
	JCGZ_23774	Uncharacterized protein. (632 aa)
	JCGZ_01202	Iwr1 domain-containing protein. (377 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01202	JCGZ_07061	A0A067L8J3	A0A067KMH2	Iwr1 domain-containing protein.	Uncharacterized protein.	0.409
JCGZ_01202	JCGZ_14140	A0A067L8J3	A0A067K978	Iwr1 domain-containing protein.	Uncharacterized protein.	0.417
JCGZ_01202	JCGZ_17927	A0A067L8J3	A0A067K4Q4	Iwr1 domain-containing protein.	Uncharacterized protein.	0.504
JCGZ_06291	JCGZ_17927	A0A067KYC4	A0A067K4Q4	Uncharacterized protein.	Uncharacterized protein.	0.413
JCGZ_06291	JCGZ_21199	A0A067KYC4	A0A067JDC5	Uncharacterized protein.	Uncharacterized protein.	0.481
JCGZ_07061	JCGZ_01202	A0A067KMH2	A0A067L8J3	Uncharacterized protein.	Iwr1 domain-containing protein.	0.409
JCGZ_07061	JCGZ_14140	A0A067KMH2	A0A067K978	Uncharacterized protein.	Uncharacterized protein.	0.456
JCGZ_07061	JCGZ_17927	A0A067KMH2	A0A067K4Q4	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_14140	JCGZ_01202	A0A067K978	A0A067L8J3	Uncharacterized protein.	Iwr1 domain-containing protein.	0.417
JCGZ_14140	JCGZ_07061	A0A067K978	A0A067KMH2	Uncharacterized protein.	Uncharacterized protein.	0.456
JCGZ_14140	JCGZ_17927	A0A067K978	A0A067K4Q4	Uncharacterized protein.	Uncharacterized protein.	0.476
JCGZ_14140	JCGZ_23774	A0A067K978	A0A067L349	Uncharacterized protein.	Uncharacterized protein.	0.472
JCGZ_17927	JCGZ_01202	A0A067K4Q4	A0A067L8J3	Uncharacterized protein.	Iwr1 domain-containing protein.	0.504
JCGZ_17927	JCGZ_06291	A0A067K4Q4	A0A067KYC4	Uncharacterized protein.	Uncharacterized protein.	0.413
JCGZ_17927	JCGZ_07061	A0A067K4Q4	A0A067KMH2	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_17927	JCGZ_14140	A0A067K4Q4	A0A067K978	Uncharacterized protein.	Uncharacterized protein.	0.476
JCGZ_17927	JCGZ_21199	A0A067K4Q4	A0A067JDC5	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_21199	JCGZ_06291	A0A067JDC5	A0A067KYC4	Uncharacterized protein.	Uncharacterized protein.	0.481
JCGZ_21199	JCGZ_17927	A0A067JDC5	A0A067K4Q4	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_23774	JCGZ_14140	A0A067L349	A0A067K978	Uncharacterized protein.	Uncharacterized protein.	0.472