(12 nodes) Mixed, incl. Receptor-like protein 23-like, and Peptide hormone binding network (Jatropha curcas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_00594	Uncharacterized protein. (258 aa)
	JCGZ_25161	Uncharacterized protein. (117 aa)
	JCGZ_13533	LRRNT_2 domain-containing protein. (260 aa)
	JCGZ_11135	LRRNT_2 domain-containing protein. (343 aa)
	JCGZ_07866	Uncharacterized protein. (300 aa)
	JCGZ_09378	Uncharacterized protein. (210 aa)
	JCGZ_08371	Uncharacterized protein. (257 aa)
	JCGZ_15951	Uncharacterized protein. (232 aa)
	JCGZ_16101	Uncharacterized protein. (438 aa)
	JCGZ_26682	Uncharacterized protein. (283 aa)
	JCGZ_15069	LRRNT_2 domain-containing protein. (225 aa)
	JCGZ_13495	Uncharacterized protein. (386 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00594	JCGZ_07866	A0A067JDB1	A0A067KNS5	Uncharacterized protein.	Uncharacterized protein.	0.546
JCGZ_00594	JCGZ_08371	A0A067JDB1	A0A067KXN0	Uncharacterized protein.	Uncharacterized protein.	0.536
JCGZ_00594	JCGZ_09378	A0A067JDB1	A0A067KTT7	Uncharacterized protein.	Uncharacterized protein.	0.482
JCGZ_00594	JCGZ_11135	A0A067JDB1	A0A067KEQ5	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.540
JCGZ_00594	JCGZ_13533	A0A067JDB1	A0A067KA79	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.520
JCGZ_00594	JCGZ_15951	A0A067JDB1	A0A067LBQ9	Uncharacterized protein.	Uncharacterized protein.	0.523
JCGZ_00594	JCGZ_25161	A0A067JDB1	A0A067JLW3	Uncharacterized protein.	Uncharacterized protein.	0.487
JCGZ_07866	JCGZ_00594	A0A067KNS5	A0A067JDB1	Uncharacterized protein.	Uncharacterized protein.	0.546
JCGZ_07866	JCGZ_09378	A0A067KNS5	A0A067KTT7	Uncharacterized protein.	Uncharacterized protein.	0.502
JCGZ_07866	JCGZ_13495	A0A067KNS5	A0A067LNJ4	Uncharacterized protein.	Uncharacterized protein.	0.515
JCGZ_07866	JCGZ_15951	A0A067KNS5	A0A067LBQ9	Uncharacterized protein.	Uncharacterized protein.	0.460
JCGZ_07866	JCGZ_25161	A0A067KNS5	A0A067JLW3	Uncharacterized protein.	Uncharacterized protein.	0.419
JCGZ_07866	JCGZ_26682	A0A067KNS5	A0A067LG71	Uncharacterized protein.	Uncharacterized protein.	0.543
JCGZ_08371	JCGZ_00594	A0A067KXN0	A0A067JDB1	Uncharacterized protein.	Uncharacterized protein.	0.536
JCGZ_08371	JCGZ_11135	A0A067KXN0	A0A067KEQ5	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.522
JCGZ_08371	JCGZ_15951	A0A067KXN0	A0A067LBQ9	Uncharacterized protein.	Uncharacterized protein.	0.441
JCGZ_08371	JCGZ_26682	A0A067KXN0	A0A067LG71	Uncharacterized protein.	Uncharacterized protein.	0.531
JCGZ_09378	JCGZ_00594	A0A067KTT7	A0A067JDB1	Uncharacterized protein.	Uncharacterized protein.	0.482
JCGZ_09378	JCGZ_07866	A0A067KTT7	A0A067KNS5	Uncharacterized protein.	Uncharacterized protein.	0.502
JCGZ_09378	JCGZ_11135	A0A067KTT7	A0A067KEQ5	Uncharacterized protein.	LRRNT_2 domain-containing protein.	0.474