12 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_21387	Uncharacterized protein. (226 aa)
	JCGZ_25925	Uncharacterized protein. (673 aa)
	JCGZ_17602	WD_REPEATS_REGION domain-containing protein. (416 aa)
	JCGZ_19323	Uncharacterized protein. (581 aa)
	JCGZ_12373	Uncharacterized protein. (718 aa)
	JCGZ_09908	CTLH domain-containing protein. (395 aa)
	JCGZ_12615	Uncharacterized protein. (385 aa)
	JCGZ_09091	Uncharacterized protein. (257 aa)
	JCGZ_24460	WD_REPEATS_REGION domain-containing protein. (366 aa)
	JCGZ_02453	Uncharacterized protein. (485 aa)
	JCGZ_06639	Uncharacterized protein. (412 aa)
	JHL18I08.4	JHL18I08.4 protein. (215 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02453	JCGZ_06639	A0A067L1Q3	A0A067LFT0	Uncharacterized protein.	Uncharacterized protein.	0.958
JCGZ_02453	JCGZ_09091	A0A067L1Q3	A0A067KKY2	Uncharacterized protein.	Uncharacterized protein.	0.965
JCGZ_02453	JCGZ_09908	A0A067L1Q3	A0A067KI79	Uncharacterized protein.	CTLH domain-containing protein.	0.931
JCGZ_02453	JCGZ_12373	A0A067L1Q3	A0A067K725	Uncharacterized protein.	Uncharacterized protein.	0.910
JCGZ_02453	JCGZ_12615	A0A067L1Q3	A0A067KK11	Uncharacterized protein.	Uncharacterized protein.	0.931
JCGZ_02453	JCGZ_17602	A0A067L1Q3	A0A067K3Q2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.928
JCGZ_02453	JCGZ_19323	A0A067L1Q3	A0A067K451	Uncharacterized protein.	Uncharacterized protein.	0.928
JCGZ_02453	JCGZ_21387	A0A067L1Q3	A0A067JAS6	Uncharacterized protein.	Uncharacterized protein.	0.910
JCGZ_02453	JCGZ_24460	A0A067L1Q3	A0A067KW76	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.928
JCGZ_02453	JCGZ_25925	A0A067L1Q3	A0A067JRE0	Uncharacterized protein.	Uncharacterized protein.	0.966
JCGZ_02453	JHL18I08.4	A0A067L1Q3	E6NU60	Uncharacterized protein.	JHL18I08.4 protein.	0.910
JCGZ_06639	JCGZ_02453	A0A067LFT0	A0A067L1Q3	Uncharacterized protein.	Uncharacterized protein.	0.958
JCGZ_06639	JCGZ_09091	A0A067LFT0	A0A067KKY2	Uncharacterized protein.	Uncharacterized protein.	0.903
JCGZ_06639	JCGZ_09908	A0A067LFT0	A0A067KI79	Uncharacterized protein.	CTLH domain-containing protein.	0.956
JCGZ_06639	JCGZ_12373	A0A067LFT0	A0A067K725	Uncharacterized protein.	Uncharacterized protein.	0.903
JCGZ_06639	JCGZ_12615	A0A067LFT0	A0A067KK11	Uncharacterized protein.	Uncharacterized protein.	0.956
JCGZ_06639	JCGZ_17602	A0A067LFT0	A0A067K3Q2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.688
JCGZ_06639	JCGZ_19323	A0A067LFT0	A0A067K451	Uncharacterized protein.	Uncharacterized protein.	0.688
JCGZ_06639	JCGZ_21387	A0A067LFT0	A0A067JAS6	Uncharacterized protein.	Uncharacterized protein.	0.912
JCGZ_06639	JCGZ_24460	A0A067LFT0	A0A067KW76	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.688