28 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_00588	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (206 aa)
	JCGZ_03030	Uncharacterized protein. (164 aa)
	JCGZ_21590	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (182 aa)
	JCGZ_03052	Uncharacterized protein. (65 aa)
	JCGZ_17546	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family. (206 aa)
	JCGZ_14187	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	JCGZ_18973	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (61 aa)
	JCGZ_22649	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (135 aa)
	JCGZ_18058	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	JCGZ_11304	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (182 aa)
	JCGZ_12534	KOW domain-containing protein. (146 aa)
	JCGZ_16453	Ribos_L4_asso_C domain-containing protein. (408 aa)
	JCGZ_07327	Uncharacterized protein. (120 aa)
	JCGZ_11415	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (146 aa)
	JCGZ_13842	Ribosomal_L2_C domain-containing protein. (261 aa)
	JCGZ_07330	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	JCGZ_10679	Ribosomal_L18_c domain-containing protein. (298 aa)
	JCGZ_03991	Uncharacterized protein. (134 aa)
	JCGZ_16044	Uncharacterized protein. (167 aa)
	JCGZ_00289	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
	JCGZ_16715	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (231 aa)
	JCGZ_15131	Uncharacterized protein. (170 aa)
	JCGZ_16736	Uncharacterized protein. (121 aa)
	JCGZ_01339	Uncharacterized protein. (112 aa)
	JCGZ_15054	Ribosomal_L18_c domain-containing protein. (299 aa)
	JCGZ_08487	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
	JCGZ_23315	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	JCGZ_04604	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00289	JCGZ_00588	A0A067L229	A0A067JD82	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.995
JCGZ_00289	JCGZ_01339	A0A067L229	A0A067LKI6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.995
JCGZ_00289	JCGZ_03030	A0A067L229	A0A067JDI3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
JCGZ_00289	JCGZ_03052	A0A067L229	A0A067JQT9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
JCGZ_00289	JCGZ_03991	A0A067L229	A0A067KUJ0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
JCGZ_00289	JCGZ_04604	A0A067L229	D2D962	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
JCGZ_00289	JCGZ_07327	A0A067L229	A0A067KC28	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.994
JCGZ_00289	JCGZ_07330	A0A067L229	A0A067KPN9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
JCGZ_00289	JCGZ_08487	A0A067L229	A0A067LNR8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.995
JCGZ_00289	JCGZ_10679	A0A067L229	A0A067KS93	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_L18_c domain-containing protein.	0.996
JCGZ_00289	JCGZ_11304	A0A067L229	A0A067K7C7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.999
JCGZ_00289	JCGZ_11415	A0A067L229	A0A067KGS0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.995
JCGZ_00289	JCGZ_12534	A0A067L229	A0A067KAN0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	KOW domain-containing protein.	0.999
JCGZ_00289	JCGZ_13842	A0A067L229	A0A067KJ21	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_L2_C domain-containing protein.	0.995
JCGZ_00289	JCGZ_14187	A0A067L229	A0A067JWR3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.992
JCGZ_00289	JCGZ_15054	A0A067L229	A0A067LLF7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_L18_c domain-containing protein.	0.996
JCGZ_00289	JCGZ_15131	A0A067L229	A0A067L9Z8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.997
JCGZ_00289	JCGZ_16044	A0A067L229	A0A067KZM9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
JCGZ_00289	JCGZ_16453	A0A067L229	A0A067KB61	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribos_L4_asso_C domain-containing protein.	0.999
JCGZ_00289	JCGZ_16715	A0A067L229	A0A067L854	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.996