49 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_05870	Uncharacterized protein. (128 aa)
	JCGZ_05851	Uncharacterized protein. (611 aa)
	JCGZ_21423	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (450 aa)
	JCGZ_21942	Helicase ATP-binding domain-containing protein. (235 aa)
	JCGZ_23334	CYCLIN domain-containing protein; Belongs to the cyclin family. (350 aa)
	JCGZ_05295	Helicase ATP-binding domain-containing protein. (758 aa)
	JCGZ_20563	Uncharacterized protein. (771 aa)
	JCGZ_24150	Uncharacterized protein. (520 aa)
	JCGZ_23953	Uncharacterized protein. (275 aa)
	JCGZ_20629	TFIIE beta domain-containing protein. (281 aa)
	JCGZ_19935	TFIIB-type domain-containing protein. (321 aa)
	JCGZ_20740	Uncharacterized protein. (70 aa)
	JCGZ_19413	BTP domain-containing protein. (241 aa)
	JCGZ_16156	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
	JCGZ_13785	TAF domain-containing protein. (540 aa)
	JCGZ_11558	TFIIB-type domain-containing protein. (305 aa)
	JCGZ_19958	BTP domain-containing protein. (376 aa)
	JCGZ_16539	BTP domain-containing protein. (356 aa)
	JCGZ_13073	TAFII28 domain-containing protein. (214 aa)
	JCGZ_07562	Uncharacterized protein. (901 aa)
	JCGZ_07044	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (139 aa)
	JCGZ_07094	Uncharacterized protein. (670 aa)
	JCGZ_10470	HTH TFE/IIEalpha-type domain-containing protein. (473 aa)
	JCGZ_13184	Uncharacterized protein. (599 aa)
	JCGZ_12081	Uncharacterized protein. (296 aa)
	JCGZ_00964	TAF domain-containing protein. (537 aa)
	JCGZ_02736	Uncharacterized protein. (201 aa)
	JCGZ_01090	Uncharacterized protein. (544 aa)
	JCGZ_24695	Uncharacterized protein. (175 aa)
	JCGZ_15913	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
	JCGZ_01895	TAFII55_N domain-containing protein. (199 aa)
	JCGZ_02941	Uncharacterized protein. (407 aa)
	JCGZ_05353	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (417 aa)
	JCGZ_04068	MAT1 domain-containing protein. (180 aa)
	JCGZ_23666	TFIID_20kDa domain-containing protein. (535 aa)
	JCGZ_04067	Uncharacterized protein. (918 aa)
	JCGZ_03950	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (533 aa)
	JCGZ_24708	TFIID_20kDa domain-containing protein. (633 aa)
	JCGZ_05475	Uncharacterized protein. (166 aa)
	JCGZ_24953	Uncharacterized protein. (1909 aa)
	JCGZ_09660	Uncharacterized protein. (189 aa)
	JCGZ_17419	DUF4101 domain-containing protein. (834 aa)
	JCGZ_16046	Uncharacterized protein. (917 aa)
	JCGZ_07963	HTH TFE/IIEalpha-type domain-containing protein. (474 aa)
	JCGZ_05562	C2H2-type domain-containing protein. (208 aa)
	JCGZ_17307	TFA2_Winged_2 domain-containing protein. (237 aa)
	JCGZ_17312	Uncharacterized protein. (242 aa)
	JHL18I08.10	JHL18I08.10 protein. (262 aa)
	JCGZ_14008	Transcription initiation factor TFIID subunit. (128 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00964	JCGZ_01090	A0A067KSX9	A0A067KWI7	TAF domain-containing protein.	Uncharacterized protein.	0.671
JCGZ_00964	JCGZ_01895	A0A067KSX9	A0A067L104	TAF domain-containing protein.	TAFII55_N domain-containing protein.	0.991
JCGZ_00964	JCGZ_02736	A0A067KSX9	A0A067KU57	TAF domain-containing protein.	Uncharacterized protein.	0.925
JCGZ_00964	JCGZ_02941	A0A067KSX9	A0A067L1A3	TAF domain-containing protein.	Uncharacterized protein.	0.856
JCGZ_00964	JCGZ_03950	A0A067KSX9	A0A067L7G8	TAF domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.811
JCGZ_00964	JCGZ_04067	A0A067KSX9	A0A067L3T5	TAF domain-containing protein.	Uncharacterized protein.	0.776
JCGZ_00964	JCGZ_04068	A0A067KSX9	A0A067L2M4	TAF domain-containing protein.	MAT1 domain-containing protein.	0.776
JCGZ_00964	JCGZ_05295	A0A067KSX9	A0A067JKA4	TAF domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.764
JCGZ_00964	JCGZ_05353	A0A067KSX9	A0A067L1C4	TAF domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.803
JCGZ_00964	JCGZ_05475	A0A067KSX9	A0A067L9T2	TAF domain-containing protein.	Uncharacterized protein.	0.632
JCGZ_00964	JCGZ_05562	A0A067KSX9	A0A067LHM1	TAF domain-containing protein.	C2H2-type domain-containing protein.	0.869
JCGZ_00964	JCGZ_05851	A0A067KSX9	A0A067J8P8	TAF domain-containing protein.	Uncharacterized protein.	0.991
JCGZ_00964	JCGZ_05870	A0A067KSX9	A0A067J8K9	TAF domain-containing protein.	Uncharacterized protein.	0.955
JCGZ_00964	JCGZ_07044	A0A067KSX9	A0A067KEN7	TAF domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.987
JCGZ_00964	JCGZ_07094	A0A067KSX9	A0A067KET0	TAF domain-containing protein.	Uncharacterized protein.	0.987
JCGZ_00964	JCGZ_07562	A0A067KSX9	A0A067KCN8	TAF domain-containing protein.	Uncharacterized protein.	0.970
JCGZ_00964	JCGZ_07963	A0A067KSX9	A0A067LEP3	TAF domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.832
JCGZ_00964	JCGZ_09660	A0A067KSX9	A0A067LAC3	TAF domain-containing protein.	Uncharacterized protein.	0.925
JCGZ_00964	JCGZ_10470	A0A067KSX9	A0A067KL60	TAF domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.832
JCGZ_00964	JCGZ_11558	A0A067KSX9	A0A067K4Y2	TAF domain-containing protein.	TFIIB-type domain-containing protein.	0.690