24 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_05652	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (152 aa)
	JCGZ_16917	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
	JCGZ_17283	Ribosomal_L16 domain-containing protein. (220 aa)
	JCGZ_03175	KH_dom-like domain-containing protein. (229 aa)
	JCGZ_08487	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (319 aa)
	JCGZ_24731	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5560 aa)
	JCGZ_21983	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (231 aa)
	JCGZ_01312	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
	JCGZ_03292	Ribosomal_L16 domain-containing protein. (221 aa)
	JCGZ_03362	Uncharacterized protein. (360 aa)
	JCGZ_22878	Brix domain-containing protein. (313 aa)
	JCGZ_13933	Brix domain-containing protein. (346 aa)
	JCGZ_15054	Ribosomal_L18_c domain-containing protein. (299 aa)
	JCGZ_22268	Uncharacterized protein. (624 aa)
	JCGZ_18047	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (129 aa)
	JCGZ_13369	Uncharacterized protein. (395 aa)
	JCGZ_08403	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (154 aa)
	JCGZ_10679	Ribosomal_L18_c domain-containing protein. (298 aa)
	JCGZ_05692	Uncharacterized protein. (202 aa)
	JCGZ_16715	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (231 aa)
	JCGZ_08405	Uncharacterized protein. (211 aa)
	JCGZ_06743	Brix domain-containing protein. (315 aa)
	JCGZ_01205	Uncharacterized protein. (189 aa)
	JCGZ_16851	WD_REPEATS_REGION domain-containing protein. (470 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01205	JCGZ_01312	A0A067LJB2	A0A067L8U4	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.519
JCGZ_01205	JCGZ_03292	A0A067LJB2	A0A067JCR1	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.820
JCGZ_01205	JCGZ_05652	A0A067LJB2	A0A067LHW4	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.758
JCGZ_01205	JCGZ_05692	A0A067LJB2	A0A067LI30	Uncharacterized protein.	Uncharacterized protein.	0.758
JCGZ_01205	JCGZ_06743	A0A067LJB2	A0A067KZN4	Uncharacterized protein.	Brix domain-containing protein.	0.972
JCGZ_01205	JCGZ_08403	A0A067LJB2	A0A067KMN8	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.758
JCGZ_01205	JCGZ_08405	A0A067LJB2	A0A067KZV5	Uncharacterized protein.	Uncharacterized protein.	0.758
JCGZ_01205	JCGZ_08487	A0A067LJB2	A0A067LNR8	Uncharacterized protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.519
JCGZ_01205	JCGZ_10679	A0A067LJB2	A0A067KS93	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.878
JCGZ_01205	JCGZ_13933	A0A067LJB2	A0A067JW89	Uncharacterized protein.	Brix domain-containing protein.	0.745
JCGZ_01205	JCGZ_15054	A0A067LJB2	A0A067LLF7	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.878
JCGZ_01205	JCGZ_16715	A0A067LJB2	A0A067L854	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.723
JCGZ_01205	JCGZ_16851	A0A067LJB2	A0A067LH78	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.918
JCGZ_01205	JCGZ_16917	A0A067LJB2	A0A067LGD2	Uncharacterized protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.817
JCGZ_01205	JCGZ_17283	A0A067LJB2	A0A067LB34	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.820
JCGZ_01205	JCGZ_21983	A0A067LJB2	A0A067JCI0	Uncharacterized protein.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.723
JCGZ_01205	JCGZ_22878	A0A067LJB2	A0A067JSR7	Uncharacterized protein.	Brix domain-containing protein.	0.656
JCGZ_01312	JCGZ_01205	A0A067L8U4	A0A067LJB2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.519
JCGZ_01312	JCGZ_03292	A0A067L8U4	A0A067JCR1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L16 domain-containing protein.	0.982
JCGZ_01312	JCGZ_03362	A0A067L8U4	A0A067JCY4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.519