26 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_24780	Uncharacterized protein; Belongs to the DEAD box helicase family. (361 aa)
	JCGZ_20044	Nudix hydrolase domain-containing protein. (319 aa)
	JCGZ_24208	Uncharacterized protein. (410 aa)
	JCGZ_06244	Btz domain-containing protein. (699 aa)
	JCGZ_24777	Uncharacterized protein; Belongs to the DEAD box helicase family. (503 aa)
	JCGZ_24785	Uncharacterized protein. (138 aa)
	JCGZ_05428	Uncharacterized protein. (1209 aa)
	JCGZ_16920	Mago-bind domain-containing protein. (239 aa)
	JCGZ_11864	Helicase ATP-binding domain-containing protein. (1270 aa)
	JCGZ_10276	Uncharacterized protein; Belongs to the DEAD box helicase family. (765 aa)
	JCGZ_08533	Uncharacterized protein. (1338 aa)
	JCGZ_00256	Smg4_UPF3 domain-containing protein. (510 aa)
	JCGZ_22782	Uncharacterized protein. (966 aa)
	JCGZ_06659	Uncharacterized protein. (1195 aa)
	JCGZ_21412	Uncharacterized protein. (970 aa)
	JCGZ_00558	Uncharacterized protein. (411 aa)
	JCGZ_21454	EST1_DNA_bind domain-containing protein. (658 aa)
	JCGZ_25949	RRM domain-containing protein. (198 aa)
	JCGZ_25965	MIF4G domain-containing protein. (868 aa)
	JCGZ_18082	Uncharacterized protein. (558 aa)
	JCGZ_19832	Uncharacterized protein. (1176 aa)
	JCGZ_11414	Uncharacterized protein; Belongs to the DEAD box helicase family. (627 aa)
	JCGZ_13232	Btz domain-containing protein. (878 aa)
	JCGZ_14641	Uncharacterized protein. (149 aa)
	JCGZ_08007	Uncharacterized protein. (1139 aa)
	JCGZ_07993	Smg4_UPF3 domain-containing protein. (536 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00256	JCGZ_00558	A0A067LED6	A0A067JD58	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.497
JCGZ_00256	JCGZ_05428	A0A067LED6	A0A067L663	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.499
JCGZ_00256	JCGZ_06659	A0A067LED6	A0A067LFU8	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.998
JCGZ_00256	JCGZ_07993	A0A067LED6	A0A067KKT4	Smg4_UPF3 domain-containing protein.	Smg4_UPF3 domain-containing protein.	0.905
JCGZ_00256	JCGZ_08533	A0A067LED6	A0A067LDJ7	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.556
JCGZ_00256	JCGZ_10276	A0A067LED6	A0A067LD75	Smg4_UPF3 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.503
JCGZ_00256	JCGZ_11414	A0A067LED6	A0A067K7M0	Smg4_UPF3 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.503
JCGZ_00256	JCGZ_11864	A0A067LED6	A0A067LBV1	Smg4_UPF3 domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.996
JCGZ_00256	JCGZ_14641	A0A067LED6	A0A067K9B5	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.995
JCGZ_00256	JCGZ_16920	A0A067LED6	A0A067L8S3	Smg4_UPF3 domain-containing protein.	Mago-bind domain-containing protein.	0.462
JCGZ_00256	JCGZ_19832	A0A067LED6	A0A067K7F3	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.503
JCGZ_00256	JCGZ_20044	A0A067LED6	A0A067LJB3	Smg4_UPF3 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.535
JCGZ_00256	JCGZ_21454	A0A067LED6	A0A067JDZ2	Smg4_UPF3 domain-containing protein.	EST1_DNA_bind domain-containing protein.	0.874
JCGZ_00256	JCGZ_22782	A0A067LED6	A0A067LFH6	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.919
JCGZ_00256	JCGZ_24208	A0A067LED6	A0A067L4G5	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.930
JCGZ_00256	JCGZ_24777	A0A067LED6	A0A067L0P3	Smg4_UPF3 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.503
JCGZ_00256	JCGZ_24780	A0A067LED6	A0A067KX66	Smg4_UPF3 domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.503
JCGZ_00256	JCGZ_24785	A0A067LED6	A0A067KX70	Smg4_UPF3 domain-containing protein.	Uncharacterized protein.	0.503
JCGZ_00256	JCGZ_25949	A0A067LED6	A0A067JH32	Smg4_UPF3 domain-containing protein.	RRM domain-containing protein.	0.970
JCGZ_00256	JCGZ_25965	A0A067LED6	A0A067JRI3	Smg4_UPF3 domain-containing protein.	MIF4G domain-containing protein.	0.864