32 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_00289	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (145 aa)
	JCGZ_01641	Uncharacterized protein. (253 aa)
	JCGZ_06352	Bms1-type G domain-containing protein. (1208 aa)
	JCGZ_08096	Bms1-type G domain-containing protein. (790 aa)
	JCGZ_24625	Uncharacterized protein. (737 aa)
	JCGZ_02551	WD_REPEATS_REGION domain-containing protein. (589 aa)
	JCGZ_00973	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (219 aa)
	JCGZ_12705	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	JCGZ_05769	Uncharacterized protein. (1324 aa)
	JCGZ_04614	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	JCGZ_06182	Utp12 domain-containing protein. (627 aa)
	JCGZ_10392	Uncharacterized protein. (581 aa)
	JCGZ_13312	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (337 aa)
	JCGZ_18041	Kri1_C domain-containing protein. (679 aa)
	JCGZ_25348	WD_REPEATS_REGION domain-containing protein. (526 aa)
	JCGZ_16015	Uncharacterized protein. (374 aa)
	JCGZ_02268	Uncharacterized protein. (340 aa)
	JHL25H03.15	JHL25H03.15 protein. (892 aa)
	JCGZ_05724	Sas10 domain-containing protein. (684 aa)
	JCGZ_03760	Uncharacterized protein. (326 aa)
	JCGZ_23315	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
	JCGZ_22136	Uncharacterized protein. (157 aa)
	JCGZ_15139	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (221 aa)
	JCGZ_10228	RRM domain-containing protein. (395 aa)
	JCGZ_15907	Uncharacterized protein. (317 aa)
	JCGZ_21647	Uncharacterized protein. (692 aa)
	JCGZ_26293	BP28CT domain-containing protein. (2103 aa)
	JCGZ_23450	Uncharacterized protein. (202 aa)
	JCGZ_25744	WD_REPEATS_REGION domain-containing protein. (452 aa)
	JCGZ_21200	Uncharacterized protein. (655 aa)
	JCGZ_20662	Uncharacterized protein. (253 aa)
	JCGZ_26315	BP28CT domain-containing protein. (360 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00289	JCGZ_00973	A0A067L229	A0A067KSQ5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.987
JCGZ_00289	JCGZ_02551	A0A067L229	A0A067KTH7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.965
JCGZ_00289	JCGZ_04614	A0A067L229	A0A067KP12	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.980
JCGZ_00289	JCGZ_05724	A0A067L229	A0A067L795	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Sas10 domain-containing protein.	0.953
JCGZ_00289	JCGZ_05769	A0A067L229	A0A067KP28	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.644
JCGZ_00289	JCGZ_06182	A0A067L229	A0A067KLK5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Utp12 domain-containing protein.	0.946
JCGZ_00289	JCGZ_06352	A0A067L229	A0A067KZM7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Bms1-type G domain-containing protein.	0.973
JCGZ_00289	JCGZ_08096	A0A067L229	A0A067KX18	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Bms1-type G domain-containing protein.	0.917
JCGZ_00289	JCGZ_12705	A0A067L229	A0A067KRG4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.	0.980
JCGZ_00289	JCGZ_13312	A0A067L229	A0A067K8F6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.574
JCGZ_00289	JCGZ_15139	A0A067L229	A0A067LLN4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.987
JCGZ_00289	JCGZ_15907	A0A067L229	A0A067LAG3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.924
JCGZ_00289	JCGZ_16015	A0A067L229	A0A067L305	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.624
JCGZ_00289	JCGZ_21200	A0A067L229	A0A067JML4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.963
JCGZ_00289	JCGZ_21647	A0A067L229	A0A067JBJ4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.921
JCGZ_00289	JCGZ_23315	A0A067L229	C9E1T5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
JCGZ_00289	JCGZ_25348	A0A067L229	A0A067JVD7	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	WD_REPEATS_REGION domain-containing protein.	0.964
JCGZ_00289	JCGZ_26293	A0A067L229	A0A067JF41	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	BP28CT domain-containing protein.	0.945
JCGZ_00289	JCGZ_26315	A0A067L229	A0A067JSG2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	BP28CT domain-containing protein.	0.945
JCGZ_00289	JHL25H03.15	A0A067L229	E6NUE1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	JHL25H03.15 protein.	0.967