STRINGSTRING
JCGZ_06717 JCGZ_06717 JCGZ_04415 JCGZ_04415 JCGZ_24370 JCGZ_24370 JCGZ_04013 JCGZ_04013 JCGZ_05032 JCGZ_05032 LSM3 LSM3 JCGZ_04012 JCGZ_04012 JCGZ_22047 JCGZ_22047 JCGZ_26675 JCGZ_26675 JCGZ_27001 JCGZ_27001 JCGZ_02928 JCGZ_02928 JCGZ_05633 JCGZ_05633 JCGZ_26681 JCGZ_26681 LSM3-2 LSM3-2 JCGZ_01391 JCGZ_01391 JCGZ_05475 JCGZ_05475 JCGZ_06854 JCGZ_06854 JCGZ_21973 JCGZ_21973 JCGZ_25997 JCGZ_25997 JCGZ_26343 JCGZ_26343 JCGZ_00595 JCGZ_00595 JCGZ_22657 JCGZ_22657 JCGZ_00587 JCGZ_00587 JCGZ_20215 JCGZ_20215 LSM4 LSM4 JCGZ_23457 JCGZ_23457 JCGZ_23577 JCGZ_23577 JCGZ_16420 JCGZ_16420 JCGZ_22659 JCGZ_22659 JCGZ_00927 JCGZ_00927 JCGZ_11864 JCGZ_11864 JCGZ_22782 JCGZ_22782 JCGZ_20044 JCGZ_20044 JCGZ_14912 JCGZ_14912 JCGZ_06523 JCGZ_06523 JHL05D22.13 JHL05D22.13 JCGZ_14579 JCGZ_14579 LSM5 LSM5 JCGZ_18269 JCGZ_18269 JCGZ_15175 JCGZ_15175 LSM5-2 LSM5-2 JCGZ_19863 JCGZ_19863 JCGZ_18900 JCGZ_18900 JCGZ_15177 JCGZ_15177 JCGZ_13716 JCGZ_13716 JCGZ_13187 JCGZ_13187 JCGZ_12063 JCGZ_12063 JCGZ_14425 JCGZ_14425 JCGZ_10671 JCGZ_10671 JCGZ_08369 JCGZ_08369 JCGZ_08787 JCGZ_08787 JCGZ_08832 JCGZ_08832 JCGZ_07101 JCGZ_07101 JCGZ_13561 JCGZ_13561 JCGZ_02751 JCGZ_02751 LSM1 LSM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JCGZ_06717Uncharacterized protein. (564 aa)
JCGZ_04415Uncharacterized protein. (1033 aa)
JCGZ_24370Uncharacterized protein. (295 aa)
JCGZ_04013Uncharacterized protein. (263 aa)
JCGZ_05032Fe2OG dioxygenase domain-containing protein. (490 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
JCGZ_04012Uncharacterized protein. (269 aa)
JCGZ_22047Uncharacterized protein. (737 aa)
JCGZ_26675Uncharacterized protein. (287 aa)
JCGZ_27001Uncharacterized protein. (274 aa)
JCGZ_02928Uncharacterized protein. (176 aa)
JCGZ_05633NOT2_3_5 domain-containing protein. (664 aa)
JCGZ_26681Uncharacterized protein. (303 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
JCGZ_01391NTP_transf_2 domain-containing protein. (499 aa)
JCGZ_05475Uncharacterized protein. (166 aa)
JCGZ_06854Uncharacterized protein. (897 aa)
JCGZ_21973Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (86 aa)
JCGZ_25997RRM domain-containing protein. (449 aa)
JCGZ_26343Ribonuclease; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress. (989 aa)
JCGZ_00595Uncharacterized protein. (300 aa)
JCGZ_22657Uncharacterized protein. (805 aa)
JCGZ_00587Uncharacterized protein. (295 aa)
JCGZ_20215Uncharacterized protein. (276 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (142 aa)
JCGZ_234575'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (965 aa)
JCGZ_23577RPOL4c domain-containing protein. (164 aa)
JCGZ_16420WD_REPEATS_REGION domain-containing protein. (1464 aa)
JCGZ_22659Uncharacterized protein. (779 aa)
JCGZ_00927Uncharacterized protein. (319 aa)
JCGZ_11864Helicase ATP-binding domain-containing protein. (1270 aa)
JCGZ_22782Uncharacterized protein. (966 aa)
JCGZ_20044Nudix hydrolase domain-containing protein. (319 aa)
JCGZ_14912HTH La-type RNA-binding domain-containing protein. (908 aa)
JCGZ_06523Fe2OG dioxygenase domain-containing protein. (508 aa)
JHL05D22.13JHL05D22.13 protein. (748 aa)
JCGZ_14579Uncharacterized protein. (1467 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (87 aa)
JCGZ_18269Uncharacterized protein. (643 aa)
JCGZ_15175Uncharacterized protein. (117 aa)
LSM5-2U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (87 aa)
JCGZ_19863RRM domain-containing protein. (469 aa)
JCGZ_18900FLZ-type domain-containing protein. (146 aa)
JCGZ_15177Uncharacterized protein. (434 aa)
JCGZ_13716Uncharacterized protein. (318 aa)
JCGZ_13187WD_REPEATS_REGION domain-containing protein. (1363 aa)
JCGZ_12063DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1118 aa)
JCGZ_14425Uncharacterized protein; Belongs to the DEAD box helicase family. (500 aa)
JCGZ_10671Sm domain-containing protein. (103 aa)
JCGZ_08369RRM domain-containing protein. (148 aa)
JCGZ_08787Uncharacterized protein. (287 aa)
JCGZ_08832Uncharacterized protein. (366 aa)
JCGZ_07101Uncharacterized protein. (275 aa)
JCGZ_13561Uncharacterized protein. (370 aa)
JCGZ_02751F-box domain-containing protein. (412 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
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