26 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_08747	Spt4 domain-containing protein. (158 aa)
	JCGZ_07475	TPR_REGION domain-containing protein. (1066 aa)
	JCGZ_09354	CID domain-containing protein. (472 aa)
	JCGZ_23616	Uncharacterized protein. (1096 aa)
	JCGZ_23918	Uncharacterized protein. (410 aa)
	JCGZ_02639	CID domain-containing protein. (566 aa)
	JCGZ_03950	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (533 aa)
	JCGZ_02197	CDC73_C domain-containing protein. (127 aa)
	JCGZ_24859	Uncharacterized protein. (515 aa)
	JCGZ_17453	TFIIS N-terminal domain-containing protein. (518 aa)
	JCGZ_09606	TFIIB-type domain-containing protein. (635 aa)
	JCGZ_24953	Uncharacterized protein. (1909 aa)
	JCGZ_26822	CID domain-containing protein. (520 aa)
	JCGZ_06535	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family. (104 aa)
	JCGZ_21252	CID domain-containing protein. (1029 aa)
	JCGZ_21498	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (88 aa)
	JCGZ_21409	Plus3 domain-containing protein. (658 aa)
	JCGZ_21559	TFIIB-type domain-containing protein. (533 aa)
	JCGZ_22538	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	JCGZ_22441	TFIIS N-terminal domain-containing protein. (371 aa)
	JCGZ_22535	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
	JCGZ_16156	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (530 aa)
	JCGZ_19308	TFIIS N-terminal domain-containing protein. (384 aa)
	JCGZ_11708	Uncharacterized protein. (631 aa)
	JCGZ_15357	Uncharacterized protein. (645 aa)
	JCGZ_11830	CID domain-containing protein. (285 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_02197	JCGZ_06535	A0A067L814	A0A067LEF4	CDC73_C domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.847
JCGZ_02197	JCGZ_07475	A0A067L814	A0A067KQ03	CDC73_C domain-containing protein.	TPR_REGION domain-containing protein.	0.988
JCGZ_02197	JCGZ_08747	A0A067L814	A0A067KM71	CDC73_C domain-containing protein.	Spt4 domain-containing protein.	0.847
JCGZ_02197	JCGZ_11708	A0A067L814	A0A067K5D8	CDC73_C domain-containing protein.	Uncharacterized protein.	0.992
JCGZ_02197	JCGZ_15357	A0A067L814	A0A067K5V8	CDC73_C domain-containing protein.	Uncharacterized protein.	0.536
JCGZ_02197	JCGZ_17453	A0A067L814	A0A067L9I5	CDC73_C domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.554
JCGZ_02197	JCGZ_19308	A0A067L814	A0A067K468	CDC73_C domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.554
JCGZ_02197	JCGZ_21409	A0A067L814	A0A067JDU6	CDC73_C domain-containing protein.	Plus3 domain-containing protein.	0.976
JCGZ_02197	JCGZ_21498	A0A067L814	A0A067JB83	CDC73_C domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.642
JCGZ_02197	JCGZ_22441	A0A067L814	A0A067JQW9	CDC73_C domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.554
JCGZ_02197	JCGZ_22535	A0A067L814	A0A067JSN8	CDC73_C domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.642
JCGZ_02197	JCGZ_22538	A0A067L814	A0A067JPD0	CDC73_C domain-containing protein.	Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family.	0.642
JCGZ_02197	JCGZ_24859	A0A067L814	A0A067L8N5	CDC73_C domain-containing protein.	Uncharacterized protein.	0.991
JCGZ_02639	JCGZ_11830	A0A067L6A1	A0A067KIF8	CID domain-containing protein.	CID domain-containing protein.	0.558
JCGZ_02639	JCGZ_21252	A0A067L6A1	A0A067JAF2	CID domain-containing protein.	CID domain-containing protein.	0.558
JCGZ_02639	JCGZ_23616	A0A067L6A1	A0A067L2I5	CID domain-containing protein.	Uncharacterized protein.	0.558
JCGZ_03950	JCGZ_06535	A0A067L7G8	A0A067LEF4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.610
JCGZ_03950	JCGZ_08747	A0A067L7G8	A0A067KM71	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Spt4 domain-containing protein.	0.610
JCGZ_03950	JCGZ_11830	A0A067L7G8	A0A067KIF8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	CID domain-containing protein.	0.484
JCGZ_03950	JCGZ_16156	A0A067L7G8	A0A067K2W8	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.901