12 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_01224	POTRA domain-containing protein. (523 aa)
	JCGZ_10040	Uncharacterized protein. (54 aa)
	JCGZ_24475	Uncharacterized protein. (318 aa)
	JCGZ_10120	Uncharacterized protein. (208 aa)
	JCGZ_02949	Bac_surface_Ag domain-containing protein. (814 aa)
	JCGZ_12866	Uncharacterized protein. (101 aa)
	JCGZ_23905	Bac_surface_Ag domain-containing protein. (360 aa)
	JCGZ_04540	Uncharacterized protein. (56 aa)
	JCGZ_17955	TPR_REGION domain-containing protein. (209 aa)
	JCGZ_17632	Uncharacterized protein. (106 aa)
	JCGZ_12414	Uncharacterized protein. (74 aa)
	JCGZ_04566	Uncharacterized protein. (327 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_01224	JCGZ_04540	A0A067LKA6	A0A067LDP6	POTRA domain-containing protein.	Uncharacterized protein.	0.985
JCGZ_01224	JCGZ_04566	A0A067LKA6	A0A067LDZ2	POTRA domain-containing protein.	Uncharacterized protein.	0.985
JCGZ_01224	JCGZ_12866	A0A067LKA6	A0A067KB20	POTRA domain-containing protein.	Uncharacterized protein.	0.912
JCGZ_01224	JCGZ_17632	A0A067LKA6	A0A067K3T4	POTRA domain-containing protein.	Uncharacterized protein.	0.912
JCGZ_01224	JCGZ_24475	A0A067LKA6	A0A067KW88	POTRA domain-containing protein.	Uncharacterized protein.	0.977
JCGZ_02949	JCGZ_24475	A0A067LDU8	A0A067KW88	Bac_surface_Ag domain-containing protein.	Uncharacterized protein.	0.567
JCGZ_04540	JCGZ_01224	A0A067LDP6	A0A067LKA6	Uncharacterized protein.	POTRA domain-containing protein.	0.985
JCGZ_04540	JCGZ_12866	A0A067LDP6	A0A067KB20	Uncharacterized protein.	Uncharacterized protein.	0.685
JCGZ_04540	JCGZ_17632	A0A067LDP6	A0A067K3T4	Uncharacterized protein.	Uncharacterized protein.	0.685
JCGZ_04540	JCGZ_23905	A0A067LDP6	A0A067L6U1	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.948
JCGZ_04540	JCGZ_24475	A0A067LDP6	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.964
JCGZ_04566	JCGZ_01224	A0A067LDZ2	A0A067LKA6	Uncharacterized protein.	POTRA domain-containing protein.	0.985
JCGZ_04566	JCGZ_12866	A0A067LDZ2	A0A067KB20	Uncharacterized protein.	Uncharacterized protein.	0.685
JCGZ_04566	JCGZ_17632	A0A067LDZ2	A0A067K3T4	Uncharacterized protein.	Uncharacterized protein.	0.685
JCGZ_04566	JCGZ_23905	A0A067LDZ2	A0A067L6U1	Uncharacterized protein.	Bac_surface_Ag domain-containing protein.	0.948
JCGZ_04566	JCGZ_24475	A0A067LDZ2	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.964
JCGZ_10040	JCGZ_10120	A0A067LN22	A0A067LN81	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_10040	JCGZ_17955	A0A067LN22	A0A067JSE5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.459
JCGZ_10120	JCGZ_10040	A0A067LN81	A0A067LN22	Uncharacterized protein.	Uncharacterized protein.	0.459
JCGZ_10120	JCGZ_24475	A0A067LN81	A0A067KW88	Uncharacterized protein.	Uncharacterized protein.	0.447