33 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_26076	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (400 aa)
	JCGZ_24019	Uncharacterized protein. (243 aa)
	JCGZ_10159	Uncharacterized protein. (198 aa)
	JCGZ_10175	Uncharacterized protein. (133 aa)
	JCGZ_05721	Uncharacterized protein. (535 aa)
	JCGZ_17260	Uncharacterized protein. (92 aa)
	JCGZ_00312	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (267 aa)
	JCGZ_24175	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (266 aa)
	JCGZ_17368	Uncharacterized protein. (467 aa)
	JCGZ_03616	Ribosomal_L18e/L15P domain-containing protein. (278 aa)
	JCGZ_26585	Uncharacterized protein. (92 aa)
	JCGZ_01641	Uncharacterized protein. (253 aa)
	JCGZ_04807	Uncharacterized protein. (211 aa)
	JCGZ_24065	Uncharacterized protein. (231 aa)
	JCGZ_24040	Uncharacterized protein. (171 aa)
	JCGZ_20175	Uncharacterized protein. (199 aa)
	JCGZ_21548	Uncharacterized protein. (157 aa)
	JCGZ_07977	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (400 aa)
	JCGZ_24752	Uncharacterized protein. (143 aa)
	JCGZ_04648	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (117 aa)
	JCGZ_02366	Uncharacterized protein. (149 aa)
	JCGZ_06075	Uncharacterized protein. (139 aa)
	JCGZ_02001	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (165 aa)
	JCGZ_08729	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (276 aa)
	JCGZ_10363	Uncharacterized protein. (194 aa)
	JCGZ_02581	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (495 aa)
	JCGZ_10714	Uncharacterized protein. (146 aa)
	JCGZ_10659	Ribosomal_L2_C domain-containing protein. (233 aa)
	JCGZ_08242	Uncharacterized protein. (137 aa)
	JCGZ_10715	MRP-S28 domain-containing protein. (420 aa)
	Rpl14	Ribosomal_L16 domain-containing protein. (194 aa)
	JCGZ_16468	Ribosomal_L2 domain-containing protein. (323 aa)
	JCGZ_21197	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (193 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00312	JCGZ_01641	A0A067LDD7	A0A067L1N0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.557
JCGZ_00312	JCGZ_02001	A0A067LDD7	A0A067KYD5	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.740
JCGZ_00312	JCGZ_02366	A0A067LDD7	A0A067KZG4	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.857
JCGZ_00312	JCGZ_02581	A0A067LDD7	A0A067KTL0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.984
JCGZ_00312	JCGZ_03616	A0A067LDD7	A0A067L9E5	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L18e/L15P domain-containing protein.	0.830
JCGZ_00312	JCGZ_04648	A0A067LDD7	A0A067L0I2	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.976
JCGZ_00312	JCGZ_04807	A0A067LDD7	A0A067L255	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.891
JCGZ_00312	JCGZ_05721	A0A067LDD7	A0A067LJ39	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.937
JCGZ_00312	JCGZ_06075	A0A067LDD7	A0A067KYT5	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.550
JCGZ_00312	JCGZ_07977	A0A067LDD7	A0A067LPW3	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.921
JCGZ_00312	JCGZ_08242	A0A067LDD7	A0A067KL23	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.550
JCGZ_00312	JCGZ_08729	A0A067LDD7	A0A067KUY1	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.960
JCGZ_00312	JCGZ_10159	A0A067LDD7	A0A067LP92	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.925
JCGZ_00312	JCGZ_10175	A0A067LDD7	A0A067LNB8	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.967
JCGZ_00312	JCGZ_10363	A0A067LDD7	A0A067KU47	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.954
JCGZ_00312	JCGZ_10659	A0A067LDD7	A0A067KS69	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L2_C domain-containing protein.	0.866
JCGZ_00312	JCGZ_10714	A0A067LDD7	A0A067KSD0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.949
JCGZ_00312	JCGZ_10715	A0A067LDD7	A0A067KG29	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	MRP-S28 domain-containing protein.	0.949
JCGZ_00312	JCGZ_16468	A0A067LDD7	A0A067KB80	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Ribosomal_L2 domain-containing protein.	0.866
JCGZ_00312	JCGZ_17260	A0A067LDD7	A0A067LEJ0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.875