107 items (Jatropha curcas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JCGZ_06500	H15 domain-containing protein. (210 aa)
	JCGZ_01198	Uncharacterized protein. (1254 aa)
	JCGZ_11894	Uncharacterized protein. (706 aa)
	JCGZ_17358	HIT-type domain-containing protein. (173 aa)
	JCGZ_15761	Uncharacterized protein. (659 aa)
	JCGZ_20073	Uncharacterized protein. (1624 aa)
	JCGZ_01566	Histone H2B; Belongs to the histone H2B family. (138 aa)
	JCGZ_24523	Uncharacterized protein. (1342 aa)
	JCGZ_02327	Photolyase/cryptochrome alpha/beta domain-containing protein. (647 aa)
	JCGZ_02297	Uncharacterized protein; Belongs to the actin family. (589 aa)
	JCGZ_16345	Uncharacterized protein. (300 aa)
	JCGZ_02012	Uncharacterized protein. (1065 aa)
	JCGZ_05673	Histone H2B; Belongs to the histone H2B family. (152 aa)
	JCGZ_05414	Histone domain-containing protein; Belongs to the histone H2B family. (259 aa)
	JCGZ_02635	Uncharacterized protein. (1245 aa)
	JCGZ_01627	Uncharacterized protein. (893 aa)
	JCGZ_05196	Uncharacterized protein. (752 aa)
	JCGZ_07419	Uncharacterized protein. (283 aa)
	JCGZ_07434	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (372 aa)
	JCGZ_11616	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (272 aa)
	JCGZ_11241	Uncharacterized protein. (1036 aa)
	JCGZ_09030	Histone H2B; Belongs to the histone H2B family. (139 aa)
	JCGZ_11685	HNH domain-containing protein. (409 aa)
	JCGZ_12545	Uncharacterized protein. (315 aa)
	JCGZ_08378	Uncharacterized protein. (1733 aa)
	JCGZ_12166	Uncharacterized protein. (579 aa)
	JCGZ_24772	WD_REPEATS_REGION domain-containing protein. (466 aa)
	JCGZ_24757	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (377 aa)
	JCGZ_16622	Uncharacterized protein. (458 aa)
	JCGZ_17120	Uncharacterized protein. (874 aa)
	JCGZ_23961	Uncharacterized protein. (723 aa)
	JCGZ_18823	WD_REPEATS_REGION domain-containing protein. (408 aa)
	JCGZ_14064	SANT domain-containing protein. (492 aa)
	JCGZ_14039	PAPA-1 domain-containing protein. (505 aa)
	JCGZ_14034	SET domain-containing protein. (842 aa)
	JCGZ_19399	Transcriptional adapter. (559 aa)
	JCGZ_19103	Uncharacterized protein. (240 aa)
	JCGZ_14618	Helicase C-terminal domain-containing protein. (562 aa)
	JCGZ_14692	WD_REPEATS_REGION domain-containing protein. (424 aa)
	JCGZ_14378	Uncharacterized protein. (2247 aa)
	JCGZ_25511	H15 domain-containing protein. (496 aa)
	JCGZ_13967	Uncharacterized protein. (422 aa)
	JCGZ_23567	Uncharacterized protein. (1543 aa)
	JCGZ_23562	Uncharacterized protein. (292 aa)
	JCGZ_25767	Uncharacterized protein. (877 aa)
	JCGZ_19627	Uncharacterized protein. (273 aa)
	JCGZ_00525	Uncharacterized protein. (458 aa)
	JCGZ_20832	PHD-type domain-containing protein. (1259 aa)
	JCGZ_01831	Uncharacterized protein. (909 aa)
	JCGZ_26220	Peptidylprolyl isomerase. (501 aa)
	JCGZ_00591	YL1_C domain-containing protein. (332 aa)
	JCGZ_21124	Uncharacterized protein. (1522 aa)
	JCGZ_20592	Uncharacterized protein. (1873 aa)
	JCGZ_22596	Uncharacterized protein. (164 aa)
	JCGZ_23546	Uncharacterized protein. (1276 aa)
	JCGZ_26414	Uncharacterized protein. (566 aa)
	JCGZ_23165	Uncharacterized protein. (73 aa)
	JCGZ_26413	DEK_C domain-containing protein. (604 aa)
	JCGZ_21849	Uncharacterized protein. (564 aa)
	SNF2	SNF2_N domain-containing protein. (393 aa)
	JCGZ_19100	Uncharacterized protein. (686 aa)
	JCGZ_21823	H15 domain-containing protein. (291 aa)
	JCGZ_21388	Uncharacterized protein. (1357 aa)
	JCGZ_05186	Uncharacterized protein. (469 aa)
	JCGZ_12553	RuvB-like helicase; Belongs to the RuvB family. (466 aa)
	JCGZ_11759	J domain-containing protein. (438 aa)
	JCGZ_15353	Uncharacterized protein. (1114 aa)
	JCGZ_14936	WD_REPEATS_REGION domain-containing protein. (456 aa)
	JCGZ_12419	Uncharacterized protein. (922 aa)
	JCGZ_07103	Uncharacterized protein. (1490 aa)
	JCGZ_07407	WD_REPEATS_REGION domain-containing protein. (495 aa)
	JCGZ_19328	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1612 aa)
	JCGZ_12125	Uncharacterized protein. (783 aa)
	JCGZ_17047	Uncharacterized protein; Belongs to the actin family. (453 aa)
	JCGZ_13448	H15 domain-containing protein. (190 aa)
	JCGZ_12298	SHNi-TPR domain-containing protein. (486 aa)
	JCGZ_19055	BCNT-C domain-containing protein. (309 aa)
	JCGZ_12287	Uncharacterized protein. (1519 aa)
	JCGZ_17677	Uncharacterized protein. (740 aa)
	JCGZ_17672	Uncharacterized protein. (1227 aa)
	JCGZ_18078	Uncharacterized protein. (847 aa)
	JCGZ_15265	Uncharacterized protein. (2307 aa)
	JCGZ_09743	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (253 aa)
	JCGZ_05667	Histone H2B; Belongs to the histone H2B family. (147 aa)
	JCGZ_05622	Uncharacterized protein. (1386 aa)
	JCGZ_05422	Histone H2B; Belongs to the histone H2B family. (143 aa)
	JCGZ_17270	YL1_C domain-containing protein. (230 aa)
	JCGZ_06510	Uncharacterized protein. (282 aa)
	JCGZ_06293	Uncharacterized protein. (389 aa)
	JCGZ_06693	WD_REPEATS_REGION domain-containing protein. (424 aa)
	JCGZ_08034	Uncharacterized protein. (506 aa)
	JCGZ_04730	H15 domain-containing protein. (212 aa)
	JCGZ_04296	Uncharacterized protein. (74 aa)
	JCGZ_04856	Uncharacterized protein. (768 aa)
	JCGZ_04353	Transcriptional adapter. (571 aa)
	JCGZ_02140	Uncharacterized protein. (1122 aa)
	JCGZ_02199	Uncharacterized protein. (1087 aa)
	JCGZ_02259	Uncharacterized protein. (458 aa)
	JCGZ_24740	Uncharacterized protein. (273 aa)
	JCGZ_02031	Uncharacterized protein. (3273 aa)
	JCGZ_15939	RuvB-like helicase; Belongs to the RuvB family. (458 aa)
	JCGZ_06342	Uncharacterized protein. (871 aa)
	JCGZ_17133	Histone domain-containing protein; Belongs to the histone H2B family. (112 aa)
	JCGZ_24472	Uncharacterized protein. (998 aa)
	JCGZ_11361	Uncharacterized protein. (2004 aa)
	JCGZ_09170	Uncharacterized protein. (1056 aa)
	JCGZ_16189	Uncharacterized protein. (1611 aa)

Your Current Organism:

Jatropha curcas

NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JCGZ_00525	JCGZ_01198	A0A067JU92	A0A067LBY3	Uncharacterized protein.	Uncharacterized protein.	0.596
JCGZ_00525	JCGZ_01627	A0A067JU92	A0A067L520	Uncharacterized protein.	Uncharacterized protein.	0.627
JCGZ_00525	JCGZ_02012	A0A067JU92	A0A067L7D7	Uncharacterized protein.	Uncharacterized protein.	0.402
JCGZ_00525	JCGZ_02031	A0A067JU92	A0A067KYG5	Uncharacterized protein.	Uncharacterized protein.	0.743
JCGZ_00525	JCGZ_02297	A0A067JU92	A0A067L890	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.613
JCGZ_00525	JCGZ_02635	A0A067JU92	A0A067L538	Uncharacterized protein.	Uncharacterized protein.	0.419
JCGZ_00525	JCGZ_05196	A0A067JU92	A0A067L1E8	Uncharacterized protein.	Uncharacterized protein.	0.405
JCGZ_00525	JCGZ_05622	A0A067JU92	A0A067LHT3	Uncharacterized protein.	Uncharacterized protein.	0.641
JCGZ_00525	JCGZ_11894	A0A067JU92	A0A067LBX7	Uncharacterized protein.	Uncharacterized protein.	0.630
JCGZ_00525	JCGZ_12166	A0A067JU92	A0A067KM46	Uncharacterized protein.	Uncharacterized protein.	0.509
JCGZ_00525	JCGZ_12287	A0A067JU92	A0A067K6H5	Uncharacterized protein.	Uncharacterized protein.	0.585
JCGZ_00525	JCGZ_12553	A0A067JU92	A0A067K7J0	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.583
JCGZ_00525	JCGZ_14039	A0A067JU92	A0A067JZS3	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.547
JCGZ_00525	JCGZ_14064	A0A067JU92	A0A067JZU0	Uncharacterized protein.	SANT domain-containing protein.	0.630
JCGZ_00525	JCGZ_14618	A0A067JU92	A0A067JY87	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.627
JCGZ_00525	JCGZ_15939	A0A067JU92	A0A067KZC1	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.783
JCGZ_00525	JCGZ_17270	A0A067JU92	A0A067LEK3	Uncharacterized protein.	YL1_C domain-containing protein.	0.691
JCGZ_00525	JCGZ_19100	A0A067JU92	A0A067K6X3	Uncharacterized protein.	Uncharacterized protein.	0.520
JCGZ_00525	JCGZ_20073	A0A067JU92	A0A067LAY8	Uncharacterized protein.	Uncharacterized protein.	0.400
JCGZ_00525	JCGZ_23567	A0A067JU92	A0A067JW49	Uncharacterized protein.	Uncharacterized protein.	0.527